Gene : Glyma.14G028200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10536 - DNA PRIMASE SMALL SUBUNIT Genomic Order:  282
Name:  ? Glyma.14G028200 Secondary Identifier:  ? PAC:30533287
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G028200 0.5kb upstream 0.5kb upstream 5079 true Chr14: 2046878-2051956 Glycine max
Glyma.14G028200 0.5kb upstream 0.5kb upstream 500 false Chr14: 2051457-2051956 Glycine max
Glyma.14G028200 0.5kb downstream 0.5kb downstream 5079 true Chr14: 2046378-2051456 Glycine max
Glyma.14G028200 0.5kb downstream 0.5kb downstream 500 false Chr14: 2046378-2046877 Glycine max
Glyma.14G028200 1.0kb upstream 1.0kb upstream 5579 true Chr14: 2046878-2052456 Glycine max
Glyma.14G028200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2051457-2052456 Glycine max
Glyma.14G028200 1.0kb downstream 1.0kb downstream 5579 true Chr14: 2045878-2051456 Glycine max
Glyma.14G028200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2045878-2046877 Glycine max
Glyma.14G028200 2.0kb upstream 2.0kb upstream 6579 true Chr14: 2046878-2053456 Glycine max
Glyma.14G028200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2051457-2053456 Glycine max
Glyma.14G028200 2.0kb downstream 2.0kb downstream 6579 true Chr14: 2044878-2051456 Glycine max
Glyma.14G028200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2044878-2046877 Glycine max
Glyma.14G028200 5.0kb upstream 5.0kb upstream 9579 true Chr14: 2046878-2056456 Glycine max
Glyma.14G028200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2051457-2056456 Glycine max
Glyma.14G028200 5.0kb downstream 5.0kb downstream 9579 true Chr14: 2041878-2051456 Glycine max
Glyma.14G028200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2041878-2046877 Glycine max
Glyma.14G028200 10.0kb upstream 10.0kb upstream 14579 true Chr14: 2046878-2061456 Glycine max
Glyma.14G028200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2051457-2061456 Glycine max
Glyma.14G028200 10.0kb downstream 10.0kb downstream 14579 true Chr14: 2036878-2051456 Glycine max
Glyma.14G028200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2036878-2046877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302363 5265 Fabidae View MSA
124063611 5270 Rosid View MSA
123741537 5271 Pentapetalae View MSA
122792233 5272 Eudicot View MSA
122044142 5273 Angiosperm View MSA
121345966 5274 Embryophyte View MSA
123424761 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188772 0.0 0.741872 Low Low
cufflinks 1.85135 0.0 6.44322   High
cufflinks 0.224378 0.0 0.874945    
cufflinks 0.34061 0.0 1.30483    
cufflinks 0.715251 0.0 2.6516    
cufflinks 0.766939 0.0 2.83328    
cufflinks 0.178651 0.0 0.703059 Low Low
cufflinks 0.47589 0.0 1.79724    
cufflinks 0.837 0.0 3.0764    
cufflinks 0.296        
cufflinks 0.034     Low Low
cufflinks 0.674        
cufflinks 0.794        
cufflinks 1.104        
cufflinks 0.032     Low Low
cufflinks 0.711        
cufflinks 0.045     Low Low
cufflinks 0.434        
cufflinks 2.296       High
cufflinks 0.43        
cufflinks 0.078        
cufflinks 0.611        
cufflinks 1.578       High
cufflinks 0.016     Low Low
cufflinks 0.696        
cufflinks 0.09        

0 Strain