Gene : Glyma.14G033200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13343:SF18 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  332
Name:  ? Glyma.14G033200 Secondary Identifier:  ? PAC:30533343
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G033200 0.5kb upstream 0.5kb upstream 8177 true Chr14: 2404893-2413069 Glycine max
Glyma.14G033200 0.5kb upstream 0.5kb upstream 500 false Chr14: 2404893-2405392 Glycine max
Glyma.14G033200 0.5kb downstream 0.5kb downstream 8177 true Chr14: 2405393-2413569 Glycine max
Glyma.14G033200 0.5kb downstream 0.5kb downstream 500 false Chr14: 2413070-2413569 Glycine max
Glyma.14G033200 1.0kb upstream 1.0kb upstream 8677 true Chr14: 2404393-2413069 Glycine max
Glyma.14G033200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2404393-2405392 Glycine max
Glyma.14G033200 1.0kb downstream 1.0kb downstream 8677 true Chr14: 2405393-2414069 Glycine max
Glyma.14G033200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2413070-2414069 Glycine max
Glyma.14G033200 2.0kb upstream 2.0kb upstream 9677 true Chr14: 2403393-2413069 Glycine max
Glyma.14G033200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2403393-2405392 Glycine max
Glyma.14G033200 2.0kb downstream 2.0kb downstream 9677 true Chr14: 2405393-2415069 Glycine max
Glyma.14G033200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2413070-2415069 Glycine max
Glyma.14G033200 5.0kb upstream 5.0kb upstream 12677 true Chr14: 2400393-2413069 Glycine max
Glyma.14G033200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2400393-2405392 Glycine max
Glyma.14G033200 5.0kb downstream 5.0kb downstream 12677 true Chr14: 2405393-2418069 Glycine max
Glyma.14G033200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2413070-2418069 Glycine max
Glyma.14G033200 10.0kb upstream 10.0kb upstream 17677 true Chr14: 2395393-2413069 Glycine max
Glyma.14G033200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2395393-2405392 Glycine max
Glyma.14G033200 10.0kb downstream 10.0kb downstream 17677 true Chr14: 2405393-2423069 Glycine max
Glyma.14G033200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2413070-2423069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302754 5265 Fabidae View MSA
124068606 5270 Rosid View MSA
123738942 5271 Pentapetalae View MSA
122769938 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.16406 0.0 26.7995   High
cufflinks 2.92463 0.0 14.3723    
cufflinks 3.72963 0.0 16.9209    
cufflinks 2.15573 0.0 11.7597    
cufflinks 2.04252 0.0 11.1205    
cufflinks 1.32746 0.0 9.13961   Low
cufflinks 1.24824 0.0 7.81257   Low
cufflinks 2.19203 0.0 14.2991    
cufflinks 2.25573 0.0 13.7369    
cufflinks 0.255        
cufflinks 0.057       Low
cufflinks 0.527        
cufflinks 0.218        
cufflinks 0.251        
cufflinks 0.163        
cufflinks 0.599        
cufflinks 0.096       Low
cufflinks 0.74        
cufflinks 0.601        
cufflinks 0.775       High
cufflinks 0.071       Low
cufflinks 0.896       High
cufflinks 0.738        
cufflinks 0.089       Low
cufflinks 0.782       High
cufflinks 0.108        

0 Strain