Gene : Glyma.14G033600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF70 - CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 Genomic Order:  336
Name:  ? Glyma.14G033600 Secondary Identifier:  ? PAC:30534277
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G033600 0.5kb upstream 0.5kb upstream 20931 true Chr14: 2445194-2466124 Glycine max
Glyma.14G033600 0.5kb upstream 0.5kb upstream 500 false Chr14: 2445194-2445693 Glycine max
Glyma.14G033600 0.5kb downstream 0.5kb downstream 20931 true Chr14: 2445694-2466624 Glycine max
Glyma.14G033600 0.5kb downstream 0.5kb downstream 500 false Chr14: 2466125-2466624 Glycine max
Glyma.14G033600 1.0kb upstream 1.0kb upstream 21431 true Chr14: 2444694-2466124 Glycine max
Glyma.14G033600 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2444694-2445693 Glycine max
Glyma.14G033600 1.0kb downstream 1.0kb downstream 21431 true Chr14: 2445694-2467124 Glycine max
Glyma.14G033600 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2466125-2467124 Glycine max
Glyma.14G033600 2.0kb upstream 2.0kb upstream 22431 true Chr14: 2443694-2466124 Glycine max
Glyma.14G033600 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2443694-2445693 Glycine max
Glyma.14G033600 2.0kb downstream 2.0kb downstream 22431 true Chr14: 2445694-2468124 Glycine max
Glyma.14G033600 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2466125-2468124 Glycine max
Glyma.14G033600 5.0kb upstream 5.0kb upstream 25431 true Chr14: 2440694-2466124 Glycine max
Glyma.14G033600 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2440694-2445693 Glycine max
Glyma.14G033600 5.0kb downstream 5.0kb downstream 25431 true Chr14: 2445694-2471124 Glycine max
Glyma.14G033600 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2466125-2471124 Glycine max
Glyma.14G033600 10.0kb upstream 10.0kb upstream 30431 true Chr14: 2435694-2466124 Glycine max
Glyma.14G033600 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2435694-2445693 Glycine max
Glyma.14G033600 10.0kb downstream 10.0kb downstream 30431 true Chr14: 2445694-2476124 Glycine max
Glyma.14G033600 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2466125-2476124 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299658 5265 Fabidae View MSA
124061763 5270 Rosid View MSA
123752228 5271 Pentapetalae View MSA
122786822 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.78254 0.0 27.9122   High
cufflinks 3.48377 0.0 10.7888   Low
cufflinks 7.61895 0.0 27.1235   High
cufflinks 5.8667 0.0 20.2409    
cufflinks 5.4242 0.0 18.459    
cufflinks 3.91765 0.0 13.3648   Low
cufflinks 5.95525 0.0 18.2606    
cufflinks 5.51052 0.0 19.097    
cufflinks 5.34922 0.0 18.511    
cufflinks 0.763       Low
cufflinks 1.142       High
cufflinks 1.084        
cufflinks 0.885        
cufflinks 0.829        
cufflinks 1.084        
cufflinks 0.931        
cufflinks 0.735       Low
cufflinks 1.018        
cufflinks 0.869        
cufflinks 0.906        
cufflinks 0.975        
cufflinks 1.001        
cufflinks 0.777       Low
cufflinks 1.302       High
cufflinks 0.853        
cufflinks 1.324       High

0 Strain