Gene : Glyma.14G033900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Genomic Order:  339
Name:  ? Glyma.14G033900 Secondary Identifier:  ? PAC:30535182
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G033900 0.5kb upstream 0.5kb upstream 2617 true Chr14: 2478241-2480857 Glycine max
Glyma.14G033900 0.5kb upstream 0.5kb upstream 500 false Chr14: 2478241-2478740 Glycine max
Glyma.14G033900 0.5kb downstream 0.5kb downstream 2617 true Chr14: 2478741-2481357 Glycine max
Glyma.14G033900 0.5kb downstream 0.5kb downstream 500 false Chr14: 2480858-2481357 Glycine max
Glyma.14G033900 1.0kb upstream 1.0kb upstream 3117 true Chr14: 2477741-2480857 Glycine max
Glyma.14G033900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2477741-2478740 Glycine max
Glyma.14G033900 1.0kb downstream 1.0kb downstream 3117 true Chr14: 2478741-2481857 Glycine max
Glyma.14G033900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2480858-2481857 Glycine max
Glyma.14G033900 2.0kb upstream 2.0kb upstream 4117 true Chr14: 2476741-2480857 Glycine max
Glyma.14G033900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2476741-2478740 Glycine max
Glyma.14G033900 2.0kb downstream 2.0kb downstream 4117 true Chr14: 2478741-2482857 Glycine max
Glyma.14G033900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2480858-2482857 Glycine max
Glyma.14G033900 5.0kb upstream 5.0kb upstream 7117 true Chr14: 2473741-2480857 Glycine max
Glyma.14G033900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2473741-2478740 Glycine max
Glyma.14G033900 5.0kb downstream 5.0kb downstream 7117 true Chr14: 2478741-2485857 Glycine max
Glyma.14G033900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2480858-2485857 Glycine max
Glyma.14G033900 10.0kb upstream 10.0kb upstream 12117 true Chr14: 2468741-2480857 Glycine max
Glyma.14G033900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2468741-2478740 Glycine max
Glyma.14G033900 10.0kb downstream 10.0kb downstream 12117 true Chr14: 2478741-2490857 Glycine max
Glyma.14G033900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2480858-2490857 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297684 5265 Fabidae View MSA
124071938 5270 Rosid View MSA
123743204 5271 Pentapetalae View MSA
122793095 5272 Eudicot View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.8011 0.0 107.31 High  
cufflinks 23.2352 0.0 79.6321 High  
cufflinks 30.6327 0.0 105.217 High  
cufflinks 39.4822 0.0 118.604 High  
cufflinks 23.4907 0.0 81.0645 High  
cufflinks 62.6424 0.0 226.489 High High
cufflinks 29.9248 0.0 105.705 High  
cufflinks 33.4456 0.0 113.473 High  
cufflinks 22.7395 0.0 78.3287 High Low
cufflinks 6.646        
cufflinks 10.165     High High
cufflinks 6.251        
cufflinks 5.044        
cufflinks 3.039       Low
cufflinks 2.1       Low
cufflinks 4.989        
cufflinks 10.344     High High
cufflinks 5.491        
cufflinks 5.868        
cufflinks 4.855        
cufflinks 8.26     High  
cufflinks 5.2        
cufflinks 5.758        
cufflinks 9.853     High High
cufflinks 4.458        
cufflinks 8.053     High  

0 Strain