Gene : Glyma.14G034400 G. max Wm82.a2.v1
Defline:  (1 of 24) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  344
Name:  ? Glyma.14G034400 Secondary Identifier:  ? PAC:30533485
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G034400 0.5kb upstream 0.5kb upstream 2442 true Chr14: 2522836-2525277 Glycine max
Glyma.14G034400 0.5kb upstream 0.5kb upstream 500 false Chr14: 2522836-2523335 Glycine max
Glyma.14G034400 0.5kb downstream 0.5kb downstream 2442 true Chr14: 2523336-2525777 Glycine max
Glyma.14G034400 0.5kb downstream 0.5kb downstream 500 false Chr14: 2525278-2525777 Glycine max
Glyma.14G034400 1.0kb upstream 1.0kb upstream 2942 true Chr14: 2522336-2525277 Glycine max
Glyma.14G034400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2522336-2523335 Glycine max
Glyma.14G034400 1.0kb downstream 1.0kb downstream 2942 true Chr14: 2523336-2526277 Glycine max
Glyma.14G034400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2525278-2526277 Glycine max
Glyma.14G034400 2.0kb upstream 2.0kb upstream 3942 true Chr14: 2521336-2525277 Glycine max
Glyma.14G034400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2521336-2523335 Glycine max
Glyma.14G034400 2.0kb downstream 2.0kb downstream 3942 true Chr14: 2523336-2527277 Glycine max
Glyma.14G034400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2525278-2527277 Glycine max
Glyma.14G034400 5.0kb upstream 5.0kb upstream 6942 true Chr14: 2518336-2525277 Glycine max
Glyma.14G034400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2518336-2523335 Glycine max
Glyma.14G034400 5.0kb downstream 5.0kb downstream 6942 true Chr14: 2523336-2530277 Glycine max
Glyma.14G034400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2525278-2530277 Glycine max
Glyma.14G034400 10.0kb upstream 10.0kb upstream 11942 true Chr14: 2513336-2525277 Glycine max
Glyma.14G034400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2513336-2523335 Glycine max
Glyma.14G034400 10.0kb downstream 10.0kb downstream 11942 true Chr14: 2523336-2535277 Glycine max
Glyma.14G034400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2525278-2535277 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310774 5265 Fabidae View MSA
124066023 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27386 0.0 4.36827    
cufflinks 2.15791 0.0 6.93042   High
cufflinks 0.945326 0.0 3.32783   Low
cufflinks 1.87669 0.0 6.1414    
cufflinks 1.4811 0.0 4.98817    
cufflinks 0.925666 0.0 3.26584   Low
cufflinks 2.03864 0.0 6.57606    
cufflinks 1.66432 0.0 5.53722    
cufflinks 1.97116 0.0 6.39453    
cufflinks 1.823       Low
cufflinks 2.065        
cufflinks 4.84       High
cufflinks 2.349        
cufflinks 3.313        
cufflinks 2.993        
cufflinks 3.176        
cufflinks 1.206       Low
cufflinks 7.177       High
cufflinks 5.434       High
cufflinks 3.379        
cufflinks 3.496        
cufflinks 3.713        
cufflinks 2.968        
cufflinks 2.25        
cufflinks 3.108        
cufflinks 2.174        

0 Strain