Gene : Glyma.14G034800 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Genomic Order:  348
Name:  ? Glyma.14G034800 Secondary Identifier:  ? PAC:30532572
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G034800 0.5kb upstream 0.5kb upstream 3404 true Chr14: 2567963-2571366 Glycine max
Glyma.14G034800 0.5kb upstream 0.5kb upstream 500 false Chr14: 2567963-2568462 Glycine max
Glyma.14G034800 0.5kb downstream 0.5kb downstream 3404 true Chr14: 2568463-2571866 Glycine max
Glyma.14G034800 0.5kb downstream 0.5kb downstream 500 false Chr14: 2571367-2571866 Glycine max
Glyma.14G034800 1.0kb upstream 1.0kb upstream 3904 true Chr14: 2567463-2571366 Glycine max
Glyma.14G034800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2567463-2568462 Glycine max
Glyma.14G034800 1.0kb downstream 1.0kb downstream 3904 true Chr14: 2568463-2572366 Glycine max
Glyma.14G034800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2571367-2572366 Glycine max
Glyma.14G034800 2.0kb upstream 2.0kb upstream 4904 true Chr14: 2566463-2571366 Glycine max
Glyma.14G034800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2566463-2568462 Glycine max
Glyma.14G034800 2.0kb downstream 2.0kb downstream 4904 true Chr14: 2568463-2573366 Glycine max
Glyma.14G034800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2571367-2573366 Glycine max
Glyma.14G034800 5.0kb upstream 5.0kb upstream 7904 true Chr14: 2563463-2571366 Glycine max
Glyma.14G034800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2563463-2568462 Glycine max
Glyma.14G034800 5.0kb downstream 5.0kb downstream 7904 true Chr14: 2568463-2576366 Glycine max
Glyma.14G034800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2571367-2576366 Glycine max
Glyma.14G034800 10.0kb upstream 10.0kb upstream 12904 true Chr14: 2558463-2571366 Glycine max
Glyma.14G034800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2558463-2568462 Glycine max
Glyma.14G034800 10.0kb downstream 10.0kb downstream 12904 true Chr14: 2568463-2581366 Glycine max
Glyma.14G034800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2571367-2581366 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310499 5265 Fabidae View MSA
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.69944 0.0 23.342   High
cufflinks 6.50307 0.0 17.7098    
cufflinks 3.09613 0.0 9.07516    
cufflinks 4.65048 0.0 12.9792    
cufflinks 3.22682 0.0 9.37313    
cufflinks 1.87713 0.0 5.89136   Low
cufflinks 4.96218 0.0 13.7611    
cufflinks 9.09076 0.0 24.3477   High
cufflinks 7.70806 0.0 20.779    
cufflinks 2.729       Low
cufflinks 4.274        
cufflinks 5.142        
cufflinks 4.301        
cufflinks 2.077       Low
cufflinks 3.139        
cufflinks 3.548        
cufflinks 4.089        
cufflinks 7.775     High High
cufflinks 7.872     High High
cufflinks 2.922        
cufflinks 7.071     High High
cufflinks 3.305        
cufflinks 3.169        
cufflinks 6.746     High High
cufflinks 3.447        
cufflinks 6.549     High High

0 Strain