Gene : Glyma.14G027000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12300:SF27 - HVA22-LIKE PROTEIN F Genomic Order:  270
Name:  ? Glyma.14G027000 Secondary Identifier:  ? PAC:30534646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G027000 0.5kb upstream 0.5kb upstream 1947 true Chr14: 1946463-1948409 Glycine max
Glyma.14G027000 0.5kb upstream 0.5kb upstream 500 false Chr14: 1947910-1948409 Glycine max
Glyma.14G027000 0.5kb downstream 0.5kb downstream 1947 true Chr14: 1945963-1947909 Glycine max
Glyma.14G027000 0.5kb downstream 0.5kb downstream 500 false Chr14: 1945963-1946462 Glycine max
Glyma.14G027000 1.0kb upstream 1.0kb upstream 2447 true Chr14: 1946463-1948909 Glycine max
Glyma.14G027000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1947910-1948909 Glycine max
Glyma.14G027000 1.0kb downstream 1.0kb downstream 2447 true Chr14: 1945463-1947909 Glycine max
Glyma.14G027000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1945463-1946462 Glycine max
Glyma.14G027000 2.0kb upstream 2.0kb upstream 3447 true Chr14: 1946463-1949909 Glycine max
Glyma.14G027000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1947910-1949909 Glycine max
Glyma.14G027000 2.0kb downstream 2.0kb downstream 3447 true Chr14: 1944463-1947909 Glycine max
Glyma.14G027000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1944463-1946462 Glycine max
Glyma.14G027000 5.0kb upstream 5.0kb upstream 6447 true Chr14: 1946463-1952909 Glycine max
Glyma.14G027000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1947910-1952909 Glycine max
Glyma.14G027000 5.0kb downstream 5.0kb downstream 6447 true Chr14: 1941463-1947909 Glycine max
Glyma.14G027000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1941463-1946462 Glycine max
Glyma.14G027000 10.0kb upstream 10.0kb upstream 11447 true Chr14: 1946463-1957909 Glycine max
Glyma.14G027000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1947910-1957909 Glycine max
Glyma.14G027000 10.0kb downstream 10.0kb downstream 11447 true Chr14: 1936463-1947909 Glycine max
Glyma.14G027000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1936463-1946462 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313435 5265 Fabidae View MSA
124064261 5270 Rosid View MSA
123742916 5271 Pentapetalae View MSA
122793296 5272 Eudicot View MSA
122047958 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.317959 0.0 1.25431   Low
cufflinks 1.21203 0.0 4.51346    
cufflinks 2.18598 0.0 7.85554    
cufflinks 1.01554 0.0 3.81283    
cufflinks 1.92695 0.0 7.00696    
cufflinks 1.17908 0.0 4.39965    
cufflinks 0.279583 0.0 1.10816   Low
cufflinks 3.84795 0.0 13.2304   High
cufflinks 2.83017 0.0 10.0032    
cufflinks 4.171       High
cufflinks 1.338        
cufflinks 0.734        
cufflinks 2.938       High
cufflinks 0.641        
cufflinks 0.081       Low
cufflinks 0.843        
cufflinks 1.825        
cufflinks 2.336        
cufflinks 0.294       Low
cufflinks 1.19        
cufflinks 1.886        
cufflinks 1.325        
cufflinks 0.659        
cufflinks 1.05        
cufflinks 1.103        
cufflinks 1.404        

0 Strain