Gene : Glyma.14G018700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30560:SF3 - TRIGGER FACTOR-LIKE PROTEIN TIG Genomic Order:  187
Name:  ? Glyma.14G018700 Secondary Identifier:  ? PAC:30534404
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G018700 0.5kb upstream 0.5kb upstream 6639 true Chr14: 1346104-1352742 Glycine max
Glyma.14G018700 0.5kb upstream 0.5kb upstream 500 false Chr14: 1352243-1352742 Glycine max
Glyma.14G018700 0.5kb downstream 0.5kb downstream 6639 true Chr14: 1345604-1352242 Glycine max
Glyma.14G018700 0.5kb downstream 0.5kb downstream 500 false Chr14: 1345604-1346103 Glycine max
Glyma.14G018700 1.0kb upstream 1.0kb upstream 7139 true Chr14: 1346104-1353242 Glycine max
Glyma.14G018700 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1352243-1353242 Glycine max
Glyma.14G018700 1.0kb downstream 1.0kb downstream 7139 true Chr14: 1345104-1352242 Glycine max
Glyma.14G018700 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1345104-1346103 Glycine max
Glyma.14G018700 2.0kb upstream 2.0kb upstream 8139 true Chr14: 1346104-1354242 Glycine max
Glyma.14G018700 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1352243-1354242 Glycine max
Glyma.14G018700 2.0kb downstream 2.0kb downstream 8139 true Chr14: 1344104-1352242 Glycine max
Glyma.14G018700 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1344104-1346103 Glycine max
Glyma.14G018700 5.0kb upstream 5.0kb upstream 11139 true Chr14: 1346104-1357242 Glycine max
Glyma.14G018700 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1352243-1357242 Glycine max
Glyma.14G018700 5.0kb downstream 5.0kb downstream 11139 true Chr14: 1341104-1352242 Glycine max
Glyma.14G018700 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1341104-1346103 Glycine max
Glyma.14G018700 10.0kb upstream 10.0kb upstream 16139 true Chr14: 1346104-1362242 Glycine max
Glyma.14G018700 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1352243-1362242 Glycine max
Glyma.14G018700 10.0kb downstream 10.0kb downstream 16139 true Chr14: 1336104-1352242 Glycine max
Glyma.14G018700 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1336104-1346103 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304208 5265 Fabidae View MSA
124061655 5270 Rosid View MSA
123738103 5271 Pentapetalae View MSA
122786628 5272 Eudicot View MSA
122042238 5273 Angiosperm View MSA
121345514 5274 Embryophyte View MSA
123423774 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.3409 0.0 85.7849 High High
cufflinks 14.029 0.0 48.5156    
cufflinks 4.83183 0.0 16.551    
cufflinks 7.75757 0.0 24.3872    
cufflinks 3.31571 0.0 13.3882    
cufflinks 1.82182 0.0 8.97638   Low
cufflinks 19.6238 0.0 67.6464   High
cufflinks 4.68805 0.0 16.2974    
cufflinks 2.36594 0.0 7.90391   Low
cufflinks 1.601        
cufflinks 0.077       Low
cufflinks 1.469        
cufflinks 0.159        
cufflinks 0.127        
cufflinks 0.102       Low
cufflinks 11.329     High High
cufflinks 0.255        
cufflinks 2.411        
cufflinks 2.379        
cufflinks 13.149     High High
cufflinks 0.147        
cufflinks 10.976     High High
cufflinks 10.23     High High
cufflinks 0.127        
cufflinks 12.642     High High
cufflinks 0.145        

0 Strain