Gene : Glyma.14G021200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13161:SF15 - SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG Genomic Order:  212
Name:  ? Glyma.14G021200 Secondary Identifier:  ? PAC:30532725
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G021200 0.5kb upstream 0.5kb upstream 5461 true Chr14: 1489197-1494657 Glycine max
Glyma.14G021200 0.5kb upstream 0.5kb upstream 500 false Chr14: 1494158-1494657 Glycine max
Glyma.14G021200 0.5kb downstream 0.5kb downstream 5461 true Chr14: 1488697-1494157 Glycine max
Glyma.14G021200 0.5kb downstream 0.5kb downstream 500 false Chr14: 1488697-1489196 Glycine max
Glyma.14G021200 1.0kb upstream 1.0kb upstream 5961 true Chr14: 1489197-1495157 Glycine max
Glyma.14G021200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1494158-1495157 Glycine max
Glyma.14G021200 1.0kb downstream 1.0kb downstream 5961 true Chr14: 1488197-1494157 Glycine max
Glyma.14G021200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1488197-1489196 Glycine max
Glyma.14G021200 2.0kb upstream 2.0kb upstream 6961 true Chr14: 1489197-1496157 Glycine max
Glyma.14G021200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1494158-1496157 Glycine max
Glyma.14G021200 2.0kb downstream 2.0kb downstream 6961 true Chr14: 1487197-1494157 Glycine max
Glyma.14G021200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1487197-1489196 Glycine max
Glyma.14G021200 5.0kb upstream 5.0kb upstream 9961 true Chr14: 1489197-1499157 Glycine max
Glyma.14G021200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1494158-1499157 Glycine max
Glyma.14G021200 5.0kb downstream 5.0kb downstream 9961 true Chr14: 1484197-1494157 Glycine max
Glyma.14G021200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1484197-1489196 Glycine max
Glyma.14G021200 10.0kb upstream 10.0kb upstream 14961 true Chr14: 1489197-1504157 Glycine max
Glyma.14G021200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1494158-1504157 Glycine max
Glyma.14G021200 10.0kb downstream 10.0kb downstream 14961 true Chr14: 1479197-1494157 Glycine max
Glyma.14G021200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1479197-1489196 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301281 5265 Fabidae View MSA
124061656 5270 Rosid View MSA
123739553 5271 Pentapetalae View MSA
122786719 5272 Eudicot View MSA
122047269 5273 Angiosperm View MSA
121346559 5274 Embryophyte View MSA
123424366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4683 0.0 38.9019   High
cufflinks 9.65178 0.0 25.7503    
cufflinks 13.9208 0.0 37.4094   High
cufflinks 7.44109 0.0 19.9223   Low
cufflinks 9.74854 0.0 26.0079    
cufflinks 8.91898 0.0 23.808    
cufflinks 8.8623 0.0 23.6628    
cufflinks 6.92715 0.0 18.5854   Low
cufflinks 10.5534 0.0 28.1613    
cufflinks 7.741     High Low
cufflinks 16.119     High High
cufflinks 12.923     High  
cufflinks 7.883     High Low
cufflinks 9.25     High  
cufflinks 13.615     High  
cufflinks 12.915     High  
cufflinks 7.836     High Low
cufflinks 12.33     High  
cufflinks 10.03     High  
cufflinks 15.621     High High
cufflinks 12.82     High  
cufflinks 13.955     High  
cufflinks 9.852     High  
cufflinks 13.41     High  
cufflinks 13.398     High  
cufflinks 10.583     High  

0 Strain