Gene : Glyma.14G067900 G. max Wm82.a2.v1
Defline:  (1 of 1) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase Genomic Order:  679
Name:  ? Glyma.14G067900 Secondary Identifier:  ? PAC:30534046
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G067900 0.5kb upstream 0.5kb upstream 1649 true Chr14: 5680978-5682626 Glycine max
Glyma.14G067900 0.5kb upstream 0.5kb upstream 500 false Chr14: 5682127-5682626 Glycine max
Glyma.14G067900 0.5kb downstream 0.5kb downstream 1649 true Chr14: 5680478-5682126 Glycine max
Glyma.14G067900 0.5kb downstream 0.5kb downstream 500 false Chr14: 5680478-5680977 Glycine max
Glyma.14G067900 1.0kb upstream 1.0kb upstream 2149 true Chr14: 5680978-5683126 Glycine max
Glyma.14G067900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 5682127-5683126 Glycine max
Glyma.14G067900 1.0kb downstream 1.0kb downstream 2149 true Chr14: 5679978-5682126 Glycine max
Glyma.14G067900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 5679978-5680977 Glycine max
Glyma.14G067900 2.0kb upstream 2.0kb upstream 3149 true Chr14: 5680978-5684126 Glycine max
Glyma.14G067900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 5682127-5684126 Glycine max
Glyma.14G067900 2.0kb downstream 2.0kb downstream 3149 true Chr14: 5678978-5682126 Glycine max
Glyma.14G067900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 5678978-5680977 Glycine max
Glyma.14G067900 5.0kb upstream 5.0kb upstream 6149 true Chr14: 5680978-5687126 Glycine max
Glyma.14G067900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 5682127-5687126 Glycine max
Glyma.14G067900 5.0kb downstream 5.0kb downstream 6149 true Chr14: 5675978-5682126 Glycine max
Glyma.14G067900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 5675978-5680977 Glycine max
Glyma.14G067900 10.0kb upstream 10.0kb upstream 11149 true Chr14: 5680978-5692126 Glycine max
Glyma.14G067900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 5682127-5692126 Glycine max
Glyma.14G067900 10.0kb downstream 10.0kb downstream 11149 true Chr14: 5670978-5682126 Glycine max
Glyma.14G067900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 5670978-5680977 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303708 5265 Fabidae View MSA
124063503 5270 Rosid View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10844 0.0 13.4199    
cufflinks 3.88036 0.0 12.7759    
cufflinks 2.65874 0.0 9.15713   Low
cufflinks 3.89592 0.0 12.8113    
cufflinks 4.50812 0.0 14.4769    
cufflinks 3.04138 0.0 10.3017   Low
cufflinks 3.70891 0.0 12.2484    
cufflinks 5.51731 0.0 17.2525   High
cufflinks 3.81131 0.0 12.5215    
cufflinks 2.924        
cufflinks 1.519       Low
cufflinks 1.994        
cufflinks 3.034        
cufflinks 3.834       High
cufflinks 2.209        
cufflinks 3.134        
cufflinks 3.019        
cufflinks 2.008        
cufflinks 3.132        
cufflinks 2.916        
cufflinks 1.542       Low
cufflinks 3.084        
cufflinks 4.23       High
cufflinks 1.654       Low
cufflinks 2.706        
cufflinks 1.829       Low

0 Strain