Gene : Glyma.14G058300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  583
Name:  ? Glyma.14G058300 Secondary Identifier:  ? PAC:30534710
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G058300 0.5kb upstream 0.5kb upstream 14957 true Chr14: 4657702-4672658 Glycine max
Glyma.14G058300 0.5kb upstream 0.5kb upstream 500 false Chr14: 4672159-4672658 Glycine max
Glyma.14G058300 0.5kb downstream 0.5kb downstream 14957 true Chr14: 4657202-4672158 Glycine max
Glyma.14G058300 0.5kb downstream 0.5kb downstream 500 false Chr14: 4657202-4657701 Glycine max
Glyma.14G058300 1.0kb upstream 1.0kb upstream 15457 true Chr14: 4657702-4673158 Glycine max
Glyma.14G058300 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4672159-4673158 Glycine max
Glyma.14G058300 1.0kb downstream 1.0kb downstream 15457 true Chr14: 4656702-4672158 Glycine max
Glyma.14G058300 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4656702-4657701 Glycine max
Glyma.14G058300 2.0kb upstream 2.0kb upstream 16457 true Chr14: 4657702-4674158 Glycine max
Glyma.14G058300 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4672159-4674158 Glycine max
Glyma.14G058300 2.0kb downstream 2.0kb downstream 16457 true Chr14: 4655702-4672158 Glycine max
Glyma.14G058300 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4655702-4657701 Glycine max
Glyma.14G058300 5.0kb upstream 5.0kb upstream 19457 true Chr14: 4657702-4677158 Glycine max
Glyma.14G058300 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4672159-4677158 Glycine max
Glyma.14G058300 5.0kb downstream 5.0kb downstream 19457 true Chr14: 4652702-4672158 Glycine max
Glyma.14G058300 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4652702-4657701 Glycine max
Glyma.14G058300 10.0kb upstream 10.0kb upstream 24457 true Chr14: 4657702-4682158 Glycine max
Glyma.14G058300 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4672159-4682158 Glycine max
Glyma.14G058300 10.0kb downstream 10.0kb downstream 24457 true Chr14: 4647702-4672158 Glycine max
Glyma.14G058300 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4647702-4657701 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122311720 5265 Fabidae View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.7599 0.0 393.354 High High
cufflinks 29.3279 0.0 132.721 High  
cufflinks 38.6963 0.0 202.327 High  
cufflinks 42.1595 0.0 227.609 High  
cufflinks 38.1686 0.0 193.293 High  
cufflinks 27.1357 0.0 118.907 High Low
cufflinks 39.027 0.0 199.439 High  
cufflinks 29.8781 0.0 136.849 High  
cufflinks 29.8441 0.0 136.092 High  
cufflinks 12.012     High High
cufflinks 8.391     High Low
cufflinks 9.819     High  
cufflinks 11.613     High  
cufflinks 12.436     High High
cufflinks 7.702     High Low
cufflinks 11.099     High  
cufflinks 8.84     High Low
cufflinks 11.211     High  
cufflinks 10.247     High  
cufflinks 11.468     High  
cufflinks 9.427     High  
cufflinks 12.184     High High
cufflinks 9.005     High Low
cufflinks 10.364     High  
cufflinks 10.789     High  
cufflinks 10.858     High  

0 Strain