Gene : Glyma.14G062100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF428 - CORONATINE-INSENSITIVE PROTEIN 1 Genomic Order:  621
Name:  ? Glyma.14G062100 Secondary Identifier:  ? PAC:30535034
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G062100 0.5kb upstream 0.5kb upstream 6274 true Chr14: 5058558-5064831 Glycine max
Glyma.14G062100 0.5kb upstream 0.5kb upstream 500 false Chr14: 5058558-5059057 Glycine max
Glyma.14G062100 0.5kb downstream 0.5kb downstream 6274 true Chr14: 5059058-5065331 Glycine max
Glyma.14G062100 0.5kb downstream 0.5kb downstream 500 false Chr14: 5064832-5065331 Glycine max
Glyma.14G062100 1.0kb upstream 1.0kb upstream 6774 true Chr14: 5058058-5064831 Glycine max
Glyma.14G062100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 5058058-5059057 Glycine max
Glyma.14G062100 1.0kb downstream 1.0kb downstream 6774 true Chr14: 5059058-5065831 Glycine max
Glyma.14G062100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 5064832-5065831 Glycine max
Glyma.14G062100 2.0kb upstream 2.0kb upstream 7774 true Chr14: 5057058-5064831 Glycine max
Glyma.14G062100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 5057058-5059057 Glycine max
Glyma.14G062100 2.0kb downstream 2.0kb downstream 7774 true Chr14: 5059058-5066831 Glycine max
Glyma.14G062100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 5064832-5066831 Glycine max
Glyma.14G062100 5.0kb upstream 5.0kb upstream 10774 true Chr14: 5054058-5064831 Glycine max
Glyma.14G062100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 5054058-5059057 Glycine max
Glyma.14G062100 5.0kb downstream 5.0kb downstream 10774 true Chr14: 5059058-5069831 Glycine max
Glyma.14G062100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 5064832-5069831 Glycine max
Glyma.14G062100 10.0kb upstream 10.0kb upstream 15774 true Chr14: 5049058-5064831 Glycine max
Glyma.14G062100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 5049058-5059057 Glycine max
Glyma.14G062100 10.0kb downstream 10.0kb downstream 15774 true Chr14: 5059058-5074831 Glycine max
Glyma.14G062100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 5064832-5074831 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240634 5265 Fabidae Singleton cluster - no MSA
124041617 5270 Rosid View MSA
123749708 5271 Pentapetalae View MSA
122790201 5272 Eudicot View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0905 0.0 57.4749    
cufflinks 9.23034 0.0 27.9094    
cufflinks 8.50745 0.0 32.49    
cufflinks 7.17265 0.0 28.7048    
cufflinks 9.42405 0.0 28.3556    
cufflinks 16.2326 0.0 48.5881   High
cufflinks 1.82998 0.0 6.21369   Low
cufflinks 8.4579 0.0 25.7771    
cufflinks 7.77915 0.0 23.8915    
cufflinks 1.596       Low
cufflinks 4.495       High
cufflinks 2.244        
cufflinks 1.791        
cufflinks 1.817        
cufflinks 1.517       Low
cufflinks 2.959        
cufflinks 1.842        
cufflinks 2.288        
cufflinks 3.062        
cufflinks 3.177        
cufflinks 5.194       High
cufflinks 3.619        
cufflinks 1.785       Low
cufflinks 5.039       High
cufflinks 3.46        
cufflinks 4.416       High

0 Strain