Gene : Glyma.14G049700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Genomic Order:  497
Name:  ? Glyma.14G049700 Secondary Identifier:  ? PAC:30535211
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G049700 0.5kb upstream 0.5kb upstream 9003 true Chr14: 3880413-3889415 Glycine max
Glyma.14G049700 0.5kb upstream 0.5kb upstream 500 false Chr14: 3888916-3889415 Glycine max
Glyma.14G049700 0.5kb downstream 0.5kb downstream 9003 true Chr14: 3879913-3888915 Glycine max
Glyma.14G049700 0.5kb downstream 0.5kb downstream 500 false Chr14: 3879913-3880412 Glycine max
Glyma.14G049700 1.0kb upstream 1.0kb upstream 9503 true Chr14: 3880413-3889915 Glycine max
Glyma.14G049700 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3888916-3889915 Glycine max
Glyma.14G049700 1.0kb downstream 1.0kb downstream 9503 true Chr14: 3879413-3888915 Glycine max
Glyma.14G049700 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3879413-3880412 Glycine max
Glyma.14G049700 2.0kb upstream 2.0kb upstream 10503 true Chr14: 3880413-3890915 Glycine max
Glyma.14G049700 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3888916-3890915 Glycine max
Glyma.14G049700 2.0kb downstream 2.0kb downstream 10503 true Chr14: 3878413-3888915 Glycine max
Glyma.14G049700 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3878413-3880412 Glycine max
Glyma.14G049700 5.0kb upstream 5.0kb upstream 13503 true Chr14: 3880413-3893915 Glycine max
Glyma.14G049700 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3888916-3893915 Glycine max
Glyma.14G049700 5.0kb downstream 5.0kb downstream 13503 true Chr14: 3875413-3888915 Glycine max
Glyma.14G049700 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3875413-3880412 Glycine max
Glyma.14G049700 10.0kb upstream 10.0kb upstream 18503 true Chr14: 3880413-3898915 Glycine max
Glyma.14G049700 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3888916-3898915 Glycine max
Glyma.14G049700 10.0kb downstream 10.0kb downstream 18503 true Chr14: 3870413-3888915 Glycine max
Glyma.14G049700 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3870413-3880412 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300260 5265 Fabidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0524 0.0 58.9374   High
cufflinks 6.34271 0.0 27.7043    
cufflinks 6.58555 0.0 23.4342    
cufflinks 8.7843 0.0 37.0235    
cufflinks 3.1685 0.0 15.5235    
cufflinks 2.97456 0.0 11.0048    
cufflinks 13.2036 0.0 53.7127   High
cufflinks 4.32333 0.0 16.7921    
cufflinks 2.15592 0.0 8.80646   Low
cufflinks 0.677        
cufflinks 0.394       Low
cufflinks 0.965        
cufflinks 0.832        
cufflinks 0.469       Low
cufflinks 0.517        
cufflinks 1.812       High
cufflinks 0.44       Low
cufflinks 0.671        
cufflinks 1.107        
cufflinks 1.247        
cufflinks 0.615        
cufflinks 1.605       High
cufflinks 1.339        
cufflinks 0.458       Low
cufflinks 1.866       High
cufflinks 0.647        

0 Strain