Gene : Glyma.14G050200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  502
Name:  ? Glyma.14G050200 Secondary Identifier:  ? PAC:30531854
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G050200 0.5kb upstream 0.5kb upstream 10675 true Chr14: 3938636-3949310 Glycine max
Glyma.14G050200 0.5kb upstream 0.5kb upstream 500 false Chr14: 3938636-3939135 Glycine max
Glyma.14G050200 0.5kb downstream 0.5kb downstream 10675 true Chr14: 3939136-3949810 Glycine max
Glyma.14G050200 0.5kb downstream 0.5kb downstream 500 false Chr14: 3949311-3949810 Glycine max
Glyma.14G050200 1.0kb upstream 1.0kb upstream 11175 true Chr14: 3938136-3949310 Glycine max
Glyma.14G050200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3938136-3939135 Glycine max
Glyma.14G050200 1.0kb downstream 1.0kb downstream 11175 true Chr14: 3939136-3950310 Glycine max
Glyma.14G050200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3949311-3950310 Glycine max
Glyma.14G050200 2.0kb upstream 2.0kb upstream 12175 true Chr14: 3937136-3949310 Glycine max
Glyma.14G050200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3937136-3939135 Glycine max
Glyma.14G050200 2.0kb downstream 2.0kb downstream 12175 true Chr14: 3939136-3951310 Glycine max
Glyma.14G050200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3949311-3951310 Glycine max
Glyma.14G050200 5.0kb upstream 5.0kb upstream 15175 true Chr14: 3934136-3949310 Glycine max
Glyma.14G050200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3934136-3939135 Glycine max
Glyma.14G050200 5.0kb downstream 5.0kb downstream 15175 true Chr14: 3939136-3954310 Glycine max
Glyma.14G050200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3949311-3954310 Glycine max
Glyma.14G050200 10.0kb upstream 10.0kb upstream 20175 true Chr14: 3929136-3949310 Glycine max
Glyma.14G050200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3929136-3939135 Glycine max
Glyma.14G050200 10.0kb downstream 10.0kb downstream 20175 true Chr14: 3939136-3959310 Glycine max
Glyma.14G050200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3949311-3959310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307640 5265 Fabidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.09847 0.0 21.0676    
cufflinks 9.45697 0.0 36.1337    
cufflinks 10.6489 0.0 41.0873   High
cufflinks 8.73336 0.0 33.4211    
cufflinks 5.35358 0.0 18.7412   Low
cufflinks 5.92931 0.0 20.6615   Low
cufflinks 8.84948 0.0 33.8946    
cufflinks 6.86014 0.0 23.7826    
cufflinks 10.8372 0.0 37.6378   High
cufflinks 0.716        
cufflinks 0.439       Low
cufflinks 1.436       High
cufflinks 0.778        
cufflinks 0.642        
cufflinks 1.823       High
cufflinks 0.788        
cufflinks 0.43       Low
cufflinks 1.472       High
cufflinks 1.29       High
cufflinks 0.804        
cufflinks 0.521       Low
cufflinks 0.852        
cufflinks 0.819        
cufflinks 0.584        
cufflinks 0.794        
cufflinks 0.688        

0 Strain