Gene : Glyma.14G053200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12309 - SEC61 GAMMA SUBUNIT Genomic Order:  532
Name:  ? Glyma.14G053200 Secondary Identifier:  ? PAC:30534656
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G053200 0.5kb upstream 0.5kb upstream 2840 true Chr14: 4207175-4210014 Glycine max
Glyma.14G053200 0.5kb upstream 0.5kb upstream 500 false Chr14: 4207175-4207674 Glycine max
Glyma.14G053200 0.5kb downstream 0.5kb downstream 2840 true Chr14: 4207675-4210514 Glycine max
Glyma.14G053200 0.5kb downstream 0.5kb downstream 500 false Chr14: 4210015-4210514 Glycine max
Glyma.14G053200 1.0kb upstream 1.0kb upstream 3340 true Chr14: 4206675-4210014 Glycine max
Glyma.14G053200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4206675-4207674 Glycine max
Glyma.14G053200 1.0kb downstream 1.0kb downstream 3340 true Chr14: 4207675-4211014 Glycine max
Glyma.14G053200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4210015-4211014 Glycine max
Glyma.14G053200 2.0kb upstream 2.0kb upstream 4340 true Chr14: 4205675-4210014 Glycine max
Glyma.14G053200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4205675-4207674 Glycine max
Glyma.14G053200 2.0kb downstream 2.0kb downstream 4340 true Chr14: 4207675-4212014 Glycine max
Glyma.14G053200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4210015-4212014 Glycine max
Glyma.14G053200 5.0kb upstream 5.0kb upstream 7340 true Chr14: 4202675-4210014 Glycine max
Glyma.14G053200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4202675-4207674 Glycine max
Glyma.14G053200 5.0kb downstream 5.0kb downstream 7340 true Chr14: 4207675-4215014 Glycine max
Glyma.14G053200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4210015-4215014 Glycine max
Glyma.14G053200 10.0kb upstream 10.0kb upstream 12340 true Chr14: 4197675-4210014 Glycine max
Glyma.14G053200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4197675-4207674 Glycine max
Glyma.14G053200 10.0kb downstream 10.0kb downstream 12340 true Chr14: 4207675-4220014 Glycine max
Glyma.14G053200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4210015-4220014 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313003 5265 Fabidae View MSA
124065252 5270 Rosid View MSA
123752578 5271 Pentapetalae View MSA
122795924 5272 Eudicot View MSA
122042910 5273 Angiosperm View MSA
121349505 5274 Embryophyte View MSA
123424142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 84.2897 0.0 227.446 High  
cufflinks 90.1699 0.0 244.631 High  
cufflinks 59.3341 0.0 158.476 High Low
cufflinks 59.0531 0.0 157.692 High Low
cufflinks 135.464 0.0 379.727 High  
cufflinks 149.509 0.0 423.412 High High
cufflinks 164.013 0.0 469.844 High High
cufflinks 107.296 0.0 294.535 High  
cufflinks 95.3151 0.0 259.452 High  
cufflinks 29.379     High  
cufflinks 16.096     High  
cufflinks 18.558     High  
cufflinks 46.497     High High
cufflinks 60.866     High High
cufflinks 10.022     High Low
cufflinks 20.617     High  
cufflinks 23.642     High  
cufflinks 25.679     High  
cufflinks 22.187     High  
cufflinks 17.114     High  
cufflinks 17.021     High  
cufflinks 19.188     High  
cufflinks 23.554     High  
cufflinks 21.704     High  
cufflinks 20.223     High  
cufflinks 19.404     High  

0 Strain