Gene : Glyma.14G056000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  560
Name:  ? Glyma.14G056000 Secondary Identifier:  ? PAC:30532369
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G056000 0.5kb upstream 0.5kb upstream 6170 true Chr14: 4435359-4441528 Glycine max
Glyma.14G056000 0.5kb upstream 0.5kb upstream 500 false Chr14: 4441029-4441528 Glycine max
Glyma.14G056000 0.5kb downstream 0.5kb downstream 6170 true Chr14: 4434859-4441028 Glycine max
Glyma.14G056000 0.5kb downstream 0.5kb downstream 500 false Chr14: 4434859-4435358 Glycine max
Glyma.14G056000 1.0kb upstream 1.0kb upstream 6670 true Chr14: 4435359-4442028 Glycine max
Glyma.14G056000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4441029-4442028 Glycine max
Glyma.14G056000 1.0kb downstream 1.0kb downstream 6670 true Chr14: 4434359-4441028 Glycine max
Glyma.14G056000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4434359-4435358 Glycine max
Glyma.14G056000 2.0kb upstream 2.0kb upstream 7670 true Chr14: 4435359-4443028 Glycine max
Glyma.14G056000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4441029-4443028 Glycine max
Glyma.14G056000 2.0kb downstream 2.0kb downstream 7670 true Chr14: 4433359-4441028 Glycine max
Glyma.14G056000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4433359-4435358 Glycine max
Glyma.14G056000 5.0kb upstream 5.0kb upstream 10670 true Chr14: 4435359-4446028 Glycine max
Glyma.14G056000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4441029-4446028 Glycine max
Glyma.14G056000 5.0kb downstream 5.0kb downstream 10670 true Chr14: 4430359-4441028 Glycine max
Glyma.14G056000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4430359-4435358 Glycine max
Glyma.14G056000 10.0kb upstream 10.0kb upstream 15670 true Chr14: 4435359-4451028 Glycine max
Glyma.14G056000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4441029-4451028 Glycine max
Glyma.14G056000 10.0kb downstream 10.0kb downstream 15670 true Chr14: 4425359-4441028 Glycine max
Glyma.14G056000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4425359-4435358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122302228 5265 Fabidae View MSA
124036661 5270 Rosid View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3898 0.0 35.9289    
cufflinks 8.54565 0.0 30.0982    
cufflinks 7.69052 0.0 27.9288    
cufflinks 15.9454 0.0 54.4149   High
cufflinks 8.48835 0.0 29.9232    
cufflinks 5.58602 0.0 18.3435   Low
cufflinks 10.8685 0.0 37.3874    
cufflinks 14.7864 0.0 50.3149   High
cufflinks 9.32276 0.0 32.4219    
cufflinks 2.037        
cufflinks 0.417       Low
cufflinks 2.241       High
cufflinks 1.678        
cufflinks 1.739        
cufflinks 0.916        
cufflinks 1.505        
cufflinks 0.687       Low
cufflinks 2.245       High
cufflinks 2.346       High
cufflinks 1.587        
cufflinks 0.682       Low
cufflinks 1.619        
cufflinks 2.149        
cufflinks 0.641       Low
cufflinks 1.479        
cufflinks 0.719       Low

0 Strain