Gene : Glyma.14G058200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  582
Name:  ? Glyma.14G058200 Secondary Identifier:  ? PAC:30533417
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G058200 0.5kb upstream 0.5kb upstream 2421 true Chr14: 4650042-4652462 Glycine max
Glyma.14G058200 0.5kb upstream 0.5kb upstream 500 false Chr14: 4651963-4652462 Glycine max
Glyma.14G058200 0.5kb downstream 0.5kb downstream 2421 true Chr14: 4649542-4651962 Glycine max
Glyma.14G058200 0.5kb downstream 0.5kb downstream 500 false Chr14: 4649542-4650041 Glycine max
Glyma.14G058200 1.0kb upstream 1.0kb upstream 2921 true Chr14: 4650042-4652962 Glycine max
Glyma.14G058200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4651963-4652962 Glycine max
Glyma.14G058200 1.0kb downstream 1.0kb downstream 2921 true Chr14: 4649042-4651962 Glycine max
Glyma.14G058200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4649042-4650041 Glycine max
Glyma.14G058200 2.0kb upstream 2.0kb upstream 3921 true Chr14: 4650042-4653962 Glycine max
Glyma.14G058200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4651963-4653962 Glycine max
Glyma.14G058200 2.0kb downstream 2.0kb downstream 3921 true Chr14: 4648042-4651962 Glycine max
Glyma.14G058200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4648042-4650041 Glycine max
Glyma.14G058200 5.0kb upstream 5.0kb upstream 6921 true Chr14: 4650042-4656962 Glycine max
Glyma.14G058200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4651963-4656962 Glycine max
Glyma.14G058200 5.0kb downstream 5.0kb downstream 6921 true Chr14: 4645042-4651962 Glycine max
Glyma.14G058200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4645042-4650041 Glycine max
Glyma.14G058200 10.0kb upstream 10.0kb upstream 11921 true Chr14: 4650042-4661962 Glycine max
Glyma.14G058200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4651963-4661962 Glycine max
Glyma.14G058200 10.0kb downstream 10.0kb downstream 11921 true Chr14: 4640042-4651962 Glycine max
Glyma.14G058200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4640042-4650041 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254606 5265 Fabidae View MSA
124063256 5270 Rosid View MSA
123736392 5271 Pentapetalae View MSA
122786016 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56707 0.0 8.61385    
cufflinks 3.25691 0.0 10.5669    
cufflinks 3.0883 0.0 10.0672    
cufflinks 0.273331 0.0 1.05645    
cufflinks 0.965501 0.0 3.51887    
cufflinks 0.171553 0.0 0.675936 Low  
cufflinks 0.0161776 0.0 0.0740965 Low Low
cufflinks 6.89798 0.0 20.0749   High
cufflinks 1.1049 0.0 3.98868    
cufflinks 0.848        
cufflinks 0.55        
cufflinks 1.836        
cufflinks 0.034     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.924        
cufflinks 2.284        
cufflinks 0.032     Low Low
cufflinks 1.229        
cufflinks 1.437        
cufflinks 2.626        
cufflinks 0.944        
cufflinks 2.68        
cufflinks 0.648        
cufflinks 0.19        
cufflinks 2.611        
cufflinks 0.313        

0 Strain