Gene : Glyma.14G044800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12416:SF3 - RRNA-PROCESSING PROTEIN UTP23 HOMOLOG Genomic Order:  448
Name:  ? Glyma.14G044800 Secondary Identifier:  ? PAC:30533305
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G044800 0.5kb upstream 0.5kb upstream 4888 true Chr14: 3401719-3406606 Glycine max
Glyma.14G044800 0.5kb upstream 0.5kb upstream 500 false Chr14: 3406107-3406606 Glycine max
Glyma.14G044800 0.5kb downstream 0.5kb downstream 4888 true Chr14: 3401219-3406106 Glycine max
Glyma.14G044800 0.5kb downstream 0.5kb downstream 500 false Chr14: 3401219-3401718 Glycine max
Glyma.14G044800 1.0kb upstream 1.0kb upstream 5388 true Chr14: 3401719-3407106 Glycine max
Glyma.14G044800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3406107-3407106 Glycine max
Glyma.14G044800 1.0kb downstream 1.0kb downstream 5388 true Chr14: 3400719-3406106 Glycine max
Glyma.14G044800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3400719-3401718 Glycine max
Glyma.14G044800 2.0kb upstream 2.0kb upstream 6388 true Chr14: 3401719-3408106 Glycine max
Glyma.14G044800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3406107-3408106 Glycine max
Glyma.14G044800 2.0kb downstream 2.0kb downstream 6388 true Chr14: 3399719-3406106 Glycine max
Glyma.14G044800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3399719-3401718 Glycine max
Glyma.14G044800 5.0kb upstream 5.0kb upstream 9388 true Chr14: 3401719-3411106 Glycine max
Glyma.14G044800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3406107-3411106 Glycine max
Glyma.14G044800 5.0kb downstream 5.0kb downstream 9388 true Chr14: 3396719-3406106 Glycine max
Glyma.14G044800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3396719-3401718 Glycine max
Glyma.14G044800 10.0kb upstream 10.0kb upstream 14388 true Chr14: 3401719-3416106 Glycine max
Glyma.14G044800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3406107-3416106 Glycine max
Glyma.14G044800 10.0kb downstream 10.0kb downstream 14388 true Chr14: 3391719-3406106 Glycine max
Glyma.14G044800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3391719-3401718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302524 5265 Fabidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.9335 0.0 17.6383    
cufflinks 3.56052 0.0 20.1571    
cufflinks 2.11357 0.0 13.9015   Low
cufflinks 3.25143 0.0 18.5602    
cufflinks 4.31378 0.0 22.6994   High
cufflinks 3.49478 0.0 19.7153    
cufflinks 2.8844 0.0 17.656    
cufflinks 3.90948 0.0 21.0805    
cufflinks 3.35676 0.0 16.7674    
cufflinks 0.329        
cufflinks 0.095       Low
cufflinks 0.298        
cufflinks 0.482       High
cufflinks 0.738       High
cufflinks 0.129       Low
cufflinks 0.358        
cufflinks 0.091       Low
cufflinks 0.298        
cufflinks 0.372        
cufflinks 0.361        
cufflinks 0.134       Low
cufflinks 0.348        
cufflinks 0.403        
cufflinks 0.169        
cufflinks 0.36        
cufflinks 0.161        

0 Strain