Gene : Glyma.14G045600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12581 - HIV-1 REV BINDING PROTEIN 2, 3 Genomic Order:  456
Name:  ? Glyma.14G045600 Secondary Identifier:  ? PAC:30533256
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G045600 0.5kb upstream 0.5kb upstream 6917 true Chr14: 3475503-3482419 Glycine max
Glyma.14G045600 0.5kb upstream 0.5kb upstream 500 false Chr14: 3475503-3476002 Glycine max
Glyma.14G045600 0.5kb downstream 0.5kb downstream 6917 true Chr14: 3476003-3482919 Glycine max
Glyma.14G045600 0.5kb downstream 0.5kb downstream 500 false Chr14: 3482420-3482919 Glycine max
Glyma.14G045600 1.0kb upstream 1.0kb upstream 7417 true Chr14: 3475003-3482419 Glycine max
Glyma.14G045600 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3475003-3476002 Glycine max
Glyma.14G045600 1.0kb downstream 1.0kb downstream 7417 true Chr14: 3476003-3483419 Glycine max
Glyma.14G045600 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3482420-3483419 Glycine max
Glyma.14G045600 2.0kb upstream 2.0kb upstream 8417 true Chr14: 3474003-3482419 Glycine max
Glyma.14G045600 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3474003-3476002 Glycine max
Glyma.14G045600 2.0kb downstream 2.0kb downstream 8417 true Chr14: 3476003-3484419 Glycine max
Glyma.14G045600 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3482420-3484419 Glycine max
Glyma.14G045600 5.0kb upstream 5.0kb upstream 11417 true Chr14: 3471003-3482419 Glycine max
Glyma.14G045600 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3471003-3476002 Glycine max
Glyma.14G045600 5.0kb downstream 5.0kb downstream 11417 true Chr14: 3476003-3487419 Glycine max
Glyma.14G045600 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3482420-3487419 Glycine max
Glyma.14G045600 10.0kb upstream 10.0kb upstream 16417 true Chr14: 3466003-3482419 Glycine max
Glyma.14G045600 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3466003-3476002 Glycine max
Glyma.14G045600 10.0kb downstream 10.0kb downstream 16417 true Chr14: 3476003-3492419 Glycine max
Glyma.14G045600 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3482420-3492419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304580 5265 Fabidae View MSA
124064553 5270 Rosid View MSA
123738984 5271 Pentapetalae View MSA
122790120 5272 Eudicot View MSA
122041852 5273 Angiosperm View MSA
121344485 5274 Embryophyte View MSA
123424552 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.51484 0.0 45.2871    
cufflinks 7.76252 0.0 28.4045    
cufflinks 3.99501 0.0 14.7233   Low
cufflinks 7.413 0.0 27.2851    
cufflinks 10.9484 0.0 38.0572   High
cufflinks 7.1277 0.0 26.3369    
cufflinks 10.1502 0.0 35.6516    
cufflinks 7.82149 0.0 28.3825    
cufflinks 7.69708 0.0 28.0331    
cufflinks 0.647        
cufflinks 0.289       Low
cufflinks 0.595        
cufflinks 1.229       High
cufflinks 1.75       High
cufflinks 0.349        
cufflinks 0.509        
cufflinks 0.422        
cufflinks 0.601        
cufflinks 0.847        
cufflinks 0.449        
cufflinks 0.374        
cufflinks 0.494        
cufflinks 0.749        
cufflinks 0.365        
cufflinks 0.453        
cufflinks 0.383        

0 Strain