Gene : Glyma.14G099200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11558//PTHR11558:SF30 - SPERMIDINE/SPERMINE SYNTHASE Genomic Order:  992
Name:  ? Glyma.14G099200 Secondary Identifier:  ? PAC:30532854
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BSUBPOLYAMSYN-PWY Glycine max pathologic  
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G099200 0.5kb upstream 0.5kb upstream 5665 true Chr14: 9605807-9611471 Glycine max
Glyma.14G099200 0.5kb upstream 0.5kb upstream 500 false Chr14: 9605807-9606306 Glycine max
Glyma.14G099200 0.5kb downstream 0.5kb downstream 5665 true Chr14: 9606307-9611971 Glycine max
Glyma.14G099200 0.5kb downstream 0.5kb downstream 500 false Chr14: 9611472-9611971 Glycine max
Glyma.14G099200 1.0kb upstream 1.0kb upstream 6165 true Chr14: 9605307-9611471 Glycine max
Glyma.14G099200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 9605307-9606306 Glycine max
Glyma.14G099200 1.0kb downstream 1.0kb downstream 6165 true Chr14: 9606307-9612471 Glycine max
Glyma.14G099200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 9611472-9612471 Glycine max
Glyma.14G099200 2.0kb upstream 2.0kb upstream 7165 true Chr14: 9604307-9611471 Glycine max
Glyma.14G099200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 9604307-9606306 Glycine max
Glyma.14G099200 2.0kb downstream 2.0kb downstream 7165 true Chr14: 9606307-9613471 Glycine max
Glyma.14G099200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 9611472-9613471 Glycine max
Glyma.14G099200 5.0kb upstream 5.0kb upstream 10165 true Chr14: 9601307-9611471 Glycine max
Glyma.14G099200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 9601307-9606306 Glycine max
Glyma.14G099200 5.0kb downstream 5.0kb downstream 10165 true Chr14: 9606307-9616471 Glycine max
Glyma.14G099200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 9611472-9616471 Glycine max
Glyma.14G099200 10.0kb upstream 10.0kb upstream 15165 true Chr14: 9596307-9611471 Glycine max
Glyma.14G099200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 9596307-9606306 Glycine max
Glyma.14G099200 10.0kb downstream 10.0kb downstream 15165 true Chr14: 9606307-9621471 Glycine max
Glyma.14G099200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 9611472-9621471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299011 5265 Fabidae View MSA
124068940 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07266 0.0 6.85941    
cufflinks 15.5573 0.0 41.6025   High
cufflinks 2.71897 0.0 8.60629    
cufflinks 6.33154 0.0 17.9604    
cufflinks 1.40953 0.0 4.88072   Low
cufflinks 2.66061 0.0 8.49677    
cufflinks 2.46375 0.0 7.98414    
cufflinks 8.5727 0.0 23.6329    
cufflinks 10.2968 0.0 28.0225   High
cufflinks 3.712        
cufflinks 1.5        
cufflinks 3.279        
cufflinks 0.141       Low
cufflinks 0.036     Low Low
cufflinks 9.794     High High
cufflinks 2.635        
cufflinks 0.544        
cufflinks 2.489        
cufflinks 6.004        
cufflinks 3.709        
cufflinks 2.657        
cufflinks 3.239        
cufflinks 5.213        
cufflinks 4.1        
cufflinks 3.404        
cufflinks 0.66        

0 Strain