Gene : Glyma.14G088400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Genomic Order:  884
Name:  ? Glyma.14G088400 Secondary Identifier:  ? PAC:30534783
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G088400 0.5kb upstream 0.5kb upstream 2780 true Chr14: 7942292-7945071 Glycine max
Glyma.14G088400 0.5kb upstream 0.5kb upstream 500 false Chr14: 7944572-7945071 Glycine max
Glyma.14G088400 0.5kb downstream 0.5kb downstream 2780 true Chr14: 7941792-7944571 Glycine max
Glyma.14G088400 0.5kb downstream 0.5kb downstream 500 false Chr14: 7941792-7942291 Glycine max
Glyma.14G088400 1.0kb upstream 1.0kb upstream 3280 true Chr14: 7942292-7945571 Glycine max
Glyma.14G088400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 7944572-7945571 Glycine max
Glyma.14G088400 1.0kb downstream 1.0kb downstream 3280 true Chr14: 7941292-7944571 Glycine max
Glyma.14G088400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 7941292-7942291 Glycine max
Glyma.14G088400 2.0kb upstream 2.0kb upstream 4280 true Chr14: 7942292-7946571 Glycine max
Glyma.14G088400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 7944572-7946571 Glycine max
Glyma.14G088400 2.0kb downstream 2.0kb downstream 4280 true Chr14: 7940292-7944571 Glycine max
Glyma.14G088400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 7940292-7942291 Glycine max
Glyma.14G088400 5.0kb upstream 5.0kb upstream 7280 true Chr14: 7942292-7949571 Glycine max
Glyma.14G088400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 7944572-7949571 Glycine max
Glyma.14G088400 5.0kb downstream 5.0kb downstream 7280 true Chr14: 7937292-7944571 Glycine max
Glyma.14G088400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 7937292-7942291 Glycine max
Glyma.14G088400 10.0kb upstream 10.0kb upstream 12280 true Chr14: 7942292-7954571 Glycine max
Glyma.14G088400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 7944572-7954571 Glycine max
Glyma.14G088400 10.0kb downstream 10.0kb downstream 12280 true Chr14: 7932292-7944571 Glycine max
Glyma.14G088400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 7932292-7942291 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300235 5265 Fabidae View MSA
124070133 5270 Rosid View MSA
123748032 5271 Pentapetalae View MSA
122792151 5272 Eudicot View MSA
122043833 5273 Angiosperm View MSA
121310197 5274 Embryophyte View MSA
123347755 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.19098 0.0 4.23578    
cufflinks 17.6438 0.0 47.2313   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.217585 0.0 0.844098 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.074        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.087       High
cufflinks 0.656       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  

0 Strain