Gene : Glyma.14G080600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  806
Name:  ? Glyma.14G080600 Secondary Identifier:  ? PAC:30532195
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G080600 0.5kb upstream 0.5kb upstream 4710 true Chr14: 6972511-6977220 Glycine max
Glyma.14G080600 0.5kb upstream 0.5kb upstream 500 false Chr14: 6976721-6977220 Glycine max
Glyma.14G080600 0.5kb downstream 0.5kb downstream 4710 true Chr14: 6972011-6976720 Glycine max
Glyma.14G080600 0.5kb downstream 0.5kb downstream 500 false Chr14: 6972011-6972510 Glycine max
Glyma.14G080600 1.0kb upstream 1.0kb upstream 5210 true Chr14: 6972511-6977720 Glycine max
Glyma.14G080600 1.0kb upstream 1.0kb upstream 1000 false Chr14: 6976721-6977720 Glycine max
Glyma.14G080600 1.0kb downstream 1.0kb downstream 5210 true Chr14: 6971511-6976720 Glycine max
Glyma.14G080600 1.0kb downstream 1.0kb downstream 1000 false Chr14: 6971511-6972510 Glycine max
Glyma.14G080600 2.0kb upstream 2.0kb upstream 6210 true Chr14: 6972511-6978720 Glycine max
Glyma.14G080600 2.0kb upstream 2.0kb upstream 2000 false Chr14: 6976721-6978720 Glycine max
Glyma.14G080600 2.0kb downstream 2.0kb downstream 6210 true Chr14: 6970511-6976720 Glycine max
Glyma.14G080600 2.0kb downstream 2.0kb downstream 2000 false Chr14: 6970511-6972510 Glycine max
Glyma.14G080600 5.0kb upstream 5.0kb upstream 9210 true Chr14: 6972511-6981720 Glycine max
Glyma.14G080600 5.0kb upstream 5.0kb upstream 5000 false Chr14: 6976721-6981720 Glycine max
Glyma.14G080600 5.0kb downstream 5.0kb downstream 9210 true Chr14: 6967511-6976720 Glycine max
Glyma.14G080600 5.0kb downstream 5.0kb downstream 5000 false Chr14: 6967511-6972510 Glycine max
Glyma.14G080600 10.0kb upstream 10.0kb upstream 14210 true Chr14: 6972511-6986720 Glycine max
Glyma.14G080600 10.0kb upstream 10.0kb upstream 10000 false Chr14: 6976721-6986720 Glycine max
Glyma.14G080600 10.0kb downstream 10.0kb downstream 14210 true Chr14: 6962511-6976720 Glycine max
Glyma.14G080600 10.0kb downstream 10.0kb downstream 10000 false Chr14: 6962511-6972510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296827 5265 Fabidae View MSA
124064535 5270 Rosid View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.038 0.0 48.1525    
cufflinks 13.7154 0.0 36.6575    
cufflinks 13.8045 0.0 36.8924    
cufflinks 6.62147 0.0 18.4003   Low
cufflinks 23.6463 0.0 63.6095 High High
cufflinks 10.7082 0.0 28.8019    
cufflinks 21.684 0.0 58.099   High
cufflinks 12.7116 0.0 34.0227    
cufflinks 12.1093 0.0 32.4486    
cufflinks 10.316     High High
cufflinks 5.223        
cufflinks 4.019       Low
cufflinks 10.106     High High
cufflinks 14.932     High High
cufflinks 6.872     High  
cufflinks 6.745        
cufflinks 10.867     High High
cufflinks 3.662       Low
cufflinks 5.329        
cufflinks 7.72     High  
cufflinks 4.33       Low
cufflinks 6.66        
cufflinks 9.028     High  
cufflinks 4.494        
cufflinks 6.651        
cufflinks 4.79        

0 Strain