Gene : Glyma.14G083000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33676:SF3 - COLD REGULATED PROTEIN 27 Genomic Order:  830
Name:  ? Glyma.14G083000 Secondary Identifier:  ? PAC:30533961
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G083000 0.5kb upstream 0.5kb upstream 5141 true Chr14: 7232331-7237471 Glycine max
Glyma.14G083000 0.5kb upstream 0.5kb upstream 500 false Chr14: 7236972-7237471 Glycine max
Glyma.14G083000 0.5kb downstream 0.5kb downstream 5141 true Chr14: 7231831-7236971 Glycine max
Glyma.14G083000 0.5kb downstream 0.5kb downstream 500 false Chr14: 7231831-7232330 Glycine max
Glyma.14G083000 1.0kb upstream 1.0kb upstream 5641 true Chr14: 7232331-7237971 Glycine max
Glyma.14G083000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 7236972-7237971 Glycine max
Glyma.14G083000 1.0kb downstream 1.0kb downstream 5641 true Chr14: 7231331-7236971 Glycine max
Glyma.14G083000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 7231331-7232330 Glycine max
Glyma.14G083000 2.0kb upstream 2.0kb upstream 6641 true Chr14: 7232331-7238971 Glycine max
Glyma.14G083000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 7236972-7238971 Glycine max
Glyma.14G083000 2.0kb downstream 2.0kb downstream 6641 true Chr14: 7230331-7236971 Glycine max
Glyma.14G083000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 7230331-7232330 Glycine max
Glyma.14G083000 5.0kb upstream 5.0kb upstream 9641 true Chr14: 7232331-7241971 Glycine max
Glyma.14G083000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 7236972-7241971 Glycine max
Glyma.14G083000 5.0kb downstream 5.0kb downstream 9641 true Chr14: 7227331-7236971 Glycine max
Glyma.14G083000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 7227331-7232330 Glycine max
Glyma.14G083000 10.0kb upstream 10.0kb upstream 14641 true Chr14: 7232331-7246971 Glycine max
Glyma.14G083000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 7236972-7246971 Glycine max
Glyma.14G083000 10.0kb downstream 10.0kb downstream 14641 true Chr14: 7222331-7236971 Glycine max
Glyma.14G083000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 7222331-7232330 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301825 5265 Fabidae View MSA
124071591 5270 Rosid View MSA
123751833 5271 Pentapetalae View MSA
122791785 5272 Eudicot View MSA
122049905 5273 Angiosperm View MSA
121311643 5274 Embryophyte View MSA
123348914 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44908 0.0 25.7963    
cufflinks 1.06413 0.0 6.08223   Low
cufflinks 9.17403 0.0 29.7895    
cufflinks 2.82536 0.0 12.9818    
cufflinks 2.5845 0.0 12.3096    
cufflinks 1.47284 0.0 7.99364   Low
cufflinks 11.8145 0.0 42.9323   High
cufflinks 10.0734 0.0 32.1312   High
cufflinks 3.7029 0.0 15.774    
cufflinks 0.126        
cufflinks 8.024     High High
cufflinks 0.57        
cufflinks 0.204        
cufflinks 0.254        
cufflinks 7.396     High High
cufflinks 0.082     Low Low
cufflinks 0.785        
cufflinks 0.814        
cufflinks 0.079     Low Low
cufflinks 0.454        
cufflinks 8.699     High High
cufflinks 0.182        
cufflinks 0.018     Low Low
cufflinks 4.17       High
cufflinks 0.161        
cufflinks 1.704        

0 Strain