Gene : Glyma.14G078100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21569:SF2 - 30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC Genomic Order:  781
Name:  ? Glyma.14G078100 Secondary Identifier:  ? PAC:30533328
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G078100 0.5kb upstream 0.5kb upstream 4071 true Chr14: 6610779-6614849 Glycine max
Glyma.14G078100 0.5kb upstream 0.5kb upstream 500 false Chr14: 6610779-6611278 Glycine max
Glyma.14G078100 0.5kb downstream 0.5kb downstream 4071 true Chr14: 6611279-6615349 Glycine max
Glyma.14G078100 0.5kb downstream 0.5kb downstream 500 false Chr14: 6614850-6615349 Glycine max
Glyma.14G078100 1.0kb upstream 1.0kb upstream 4571 true Chr14: 6610279-6614849 Glycine max
Glyma.14G078100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 6610279-6611278 Glycine max
Glyma.14G078100 1.0kb downstream 1.0kb downstream 4571 true Chr14: 6611279-6615849 Glycine max
Glyma.14G078100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 6614850-6615849 Glycine max
Glyma.14G078100 2.0kb upstream 2.0kb upstream 5571 true Chr14: 6609279-6614849 Glycine max
Glyma.14G078100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 6609279-6611278 Glycine max
Glyma.14G078100 2.0kb downstream 2.0kb downstream 5571 true Chr14: 6611279-6616849 Glycine max
Glyma.14G078100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 6614850-6616849 Glycine max
Glyma.14G078100 5.0kb upstream 5.0kb upstream 8571 true Chr14: 6606279-6614849 Glycine max
Glyma.14G078100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 6606279-6611278 Glycine max
Glyma.14G078100 5.0kb downstream 5.0kb downstream 8571 true Chr14: 6611279-6619849 Glycine max
Glyma.14G078100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 6614850-6619849 Glycine max
Glyma.14G078100 10.0kb upstream 10.0kb upstream 13571 true Chr14: 6601279-6614849 Glycine max
Glyma.14G078100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 6601279-6611278 Glycine max
Glyma.14G078100 10.0kb downstream 10.0kb downstream 13571 true Chr14: 6611279-6624849 Glycine max
Glyma.14G078100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 6614850-6624849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304774 5265 Fabidae View MSA
124063747 5270 Rosid View MSA
123737620 5271 Pentapetalae View MSA
122790532 5272 Eudicot View MSA
122043582 5273 Angiosperm View MSA
121345989 5274 Embryophyte View MSA
123426879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.1353 0.0 104.601 High High
cufflinks 16.5089 0.0 45.0306    
cufflinks 12.5743 0.0 35.0972    
cufflinks 12.0247 0.0 33.7044    
cufflinks 9.10462 0.0 26.2685    
cufflinks 5.09421 0.0 15.9389   Low
cufflinks 19.7927 0.0 53.4516    
cufflinks 14.3497 0.0 39.5159    
cufflinks 7.92647 0.0 23.2644    
cufflinks 3.919        
cufflinks 0.933       Low
cufflinks 2.77        
cufflinks 1.475        
cufflinks 1.625        
cufflinks 1.073        
cufflinks 12.863     High High
cufflinks 0.661       Low
cufflinks 2.963        
cufflinks 4.526        
cufflinks 12.585     High High
cufflinks 1.137        
cufflinks 11.278     High High
cufflinks 13.592     High High
cufflinks 1.175        
cufflinks 12.805     High High
cufflinks 1.039        

0 Strain