Gene : Glyma.14G078200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12956//PTHR12956:SF17 - ALKALINE CERAMIDASE-RELATED Genomic Order:  782
Name:  ? Glyma.14G078200 Secondary Identifier:  ? PAC:30533830
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G078200 0.5kb upstream 0.5kb upstream 4264 true Chr14: 6616829-6621092 Glycine max
Glyma.14G078200 0.5kb upstream 0.5kb upstream 500 false Chr14: 6616829-6617328 Glycine max
Glyma.14G078200 0.5kb downstream 0.5kb downstream 4264 true Chr14: 6617329-6621592 Glycine max
Glyma.14G078200 0.5kb downstream 0.5kb downstream 500 false Chr14: 6621093-6621592 Glycine max
Glyma.14G078200 1.0kb upstream 1.0kb upstream 4764 true Chr14: 6616329-6621092 Glycine max
Glyma.14G078200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 6616329-6617328 Glycine max
Glyma.14G078200 1.0kb downstream 1.0kb downstream 4764 true Chr14: 6617329-6622092 Glycine max
Glyma.14G078200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 6621093-6622092 Glycine max
Glyma.14G078200 2.0kb upstream 2.0kb upstream 5764 true Chr14: 6615329-6621092 Glycine max
Glyma.14G078200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 6615329-6617328 Glycine max
Glyma.14G078200 2.0kb downstream 2.0kb downstream 5764 true Chr14: 6617329-6623092 Glycine max
Glyma.14G078200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 6621093-6623092 Glycine max
Glyma.14G078200 5.0kb upstream 5.0kb upstream 8764 true Chr14: 6612329-6621092 Glycine max
Glyma.14G078200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 6612329-6617328 Glycine max
Glyma.14G078200 5.0kb downstream 5.0kb downstream 8764 true Chr14: 6617329-6626092 Glycine max
Glyma.14G078200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 6621093-6626092 Glycine max
Glyma.14G078200 10.0kb upstream 10.0kb upstream 13764 true Chr14: 6607329-6621092 Glycine max
Glyma.14G078200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 6607329-6617328 Glycine max
Glyma.14G078200 10.0kb downstream 10.0kb downstream 13764 true Chr14: 6617329-6631092 Glycine max
Glyma.14G078200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 6621093-6631092 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043522 5273 Angiosperm View MSA
122312163 5265 Fabidae View MSA
124064834 5270 Rosid View MSA
123741279 5271 Pentapetalae View MSA
122792528 5272 Eudicot View MSA
121343906 5274 Embryophyte View MSA
123379940 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36535 0.0 7.40748   Low
cufflinks 4.36942 0.0 17.6318    
cufflinks 2.79195 0.0 11.2285   Low
cufflinks 5.52562 0.0 21.5693    
cufflinks 6.08238 0.0 22.5584    
cufflinks 6.40345 0.0 20.395    
cufflinks 5.83685 0.0 18.8586    
cufflinks 5.21656 0.0 20.2012    
cufflinks 4.21963 0.0 14.5956    
cufflinks 2.885       High
cufflinks 0.966       Low
cufflinks 1.532        
cufflinks 2.15       High
cufflinks 2.469       High
cufflinks 1.022        
cufflinks 1.356        
cufflinks 1.696        
cufflinks 2.465       High
cufflinks 1.428        
cufflinks 1.32        
cufflinks 0.879       Low
cufflinks 1.26        
cufflinks 1.388        
cufflinks 0.899       Low
cufflinks 1.278        
cufflinks 1.28        

0 Strain