Gene : Glyma.14G078500 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3068 - mRNA splicing factor Genomic Order:  785
Name:  ? Glyma.14G078500 Secondary Identifier:  ? PAC:30533904
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G078500 0.5kb upstream 0.5kb upstream 1910 true Chr14: 6640916-6642825 Glycine max
Glyma.14G078500 0.5kb upstream 0.5kb upstream 500 false Chr14: 6640916-6641415 Glycine max
Glyma.14G078500 0.5kb downstream 0.5kb downstream 1910 true Chr14: 6641416-6643325 Glycine max
Glyma.14G078500 0.5kb downstream 0.5kb downstream 500 false Chr14: 6642826-6643325 Glycine max
Glyma.14G078500 1.0kb upstream 1.0kb upstream 2410 true Chr14: 6640416-6642825 Glycine max
Glyma.14G078500 1.0kb upstream 1.0kb upstream 1000 false Chr14: 6640416-6641415 Glycine max
Glyma.14G078500 1.0kb downstream 1.0kb downstream 2410 true Chr14: 6641416-6643825 Glycine max
Glyma.14G078500 1.0kb downstream 1.0kb downstream 1000 false Chr14: 6642826-6643825 Glycine max
Glyma.14G078500 2.0kb upstream 2.0kb upstream 3410 true Chr14: 6639416-6642825 Glycine max
Glyma.14G078500 2.0kb upstream 2.0kb upstream 2000 false Chr14: 6639416-6641415 Glycine max
Glyma.14G078500 2.0kb downstream 2.0kb downstream 3410 true Chr14: 6641416-6644825 Glycine max
Glyma.14G078500 2.0kb downstream 2.0kb downstream 2000 false Chr14: 6642826-6644825 Glycine max
Glyma.14G078500 5.0kb upstream 5.0kb upstream 6410 true Chr14: 6636416-6642825 Glycine max
Glyma.14G078500 5.0kb upstream 5.0kb upstream 5000 false Chr14: 6636416-6641415 Glycine max
Glyma.14G078500 5.0kb downstream 5.0kb downstream 6410 true Chr14: 6641416-6647825 Glycine max
Glyma.14G078500 5.0kb downstream 5.0kb downstream 5000 false Chr14: 6642826-6647825 Glycine max
Glyma.14G078500 10.0kb upstream 10.0kb upstream 11410 true Chr14: 6631416-6642825 Glycine max
Glyma.14G078500 10.0kb upstream 10.0kb upstream 10000 false Chr14: 6631416-6641415 Glycine max
Glyma.14G078500 10.0kb downstream 10.0kb downstream 11410 true Chr14: 6641416-6652825 Glycine max
Glyma.14G078500 10.0kb downstream 10.0kb downstream 10000 false Chr14: 6642826-6652825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303905 5265 Fabidae View MSA
124067488 5270 Rosid View MSA
123737510 5271 Pentapetalae View MSA
122786189 5272 Eudicot View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31339 0.0 4.51983   Low
cufflinks 2.971 0.0 9.29674    
cufflinks 1.27677 0.0 4.44553   Low
cufflinks 2.53243 0.0 8.06107    
cufflinks 3.27733 0.0 9.93522   High
cufflinks 2.23962 0.0 7.23364    
cufflinks 2.74869 0.0 8.57167    
cufflinks 2.44384 0.0 7.8515    
cufflinks 2.65604 0.0 8.39896    
cufflinks 4.895        
cufflinks 2.714       Low
cufflinks 3.577        
cufflinks 5.836       High
cufflinks 6.957     High High
cufflinks 3.566        
cufflinks 4.242        
cufflinks 2.997       Low
cufflinks 4.027        
cufflinks 5.509       High
cufflinks 3.779        
cufflinks 3.308        
cufflinks 3.64        
cufflinks 4.139        
cufflinks 2.798       Low
cufflinks 3.9        
cufflinks 3.567        

0 Strain