Gene : Glyma.14G132800 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H Genomic Order:  1328
Name:  ? Glyma.14G132800 Secondary Identifier:  ? PAC:30534282
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G132800 0.5kb upstream 0.5kb upstream 4641 true Chr14: 22783132-22787772 Glycine max
Glyma.14G132800 0.5kb upstream 0.5kb upstream 500 false Chr14: 22787273-22787772 Glycine max
Glyma.14G132800 0.5kb downstream 0.5kb downstream 4641 true Chr14: 22782632-22787272 Glycine max
Glyma.14G132800 0.5kb downstream 0.5kb downstream 500 false Chr14: 22782632-22783131 Glycine max
Glyma.14G132800 1.0kb upstream 1.0kb upstream 5141 true Chr14: 22783132-22788272 Glycine max
Glyma.14G132800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 22787273-22788272 Glycine max
Glyma.14G132800 1.0kb downstream 1.0kb downstream 5141 true Chr14: 22782132-22787272 Glycine max
Glyma.14G132800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 22782132-22783131 Glycine max
Glyma.14G132800 2.0kb upstream 2.0kb upstream 6141 true Chr14: 22783132-22789272 Glycine max
Glyma.14G132800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 22787273-22789272 Glycine max
Glyma.14G132800 2.0kb downstream 2.0kb downstream 6141 true Chr14: 22781132-22787272 Glycine max
Glyma.14G132800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 22781132-22783131 Glycine max
Glyma.14G132800 5.0kb upstream 5.0kb upstream 9141 true Chr14: 22783132-22792272 Glycine max
Glyma.14G132800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 22787273-22792272 Glycine max
Glyma.14G132800 5.0kb downstream 5.0kb downstream 9141 true Chr14: 22778132-22787272 Glycine max
Glyma.14G132800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 22778132-22783131 Glycine max
Glyma.14G132800 10.0kb upstream 10.0kb upstream 14141 true Chr14: 22783132-22797272 Glycine max
Glyma.14G132800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 22787273-22797272 Glycine max
Glyma.14G132800 10.0kb downstream 10.0kb downstream 14141 true Chr14: 22773132-22787272 Glycine max
Glyma.14G132800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 22773132-22783131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041237 5273 Angiosperm View MSA
122300345 5265 Fabidae View MSA
124065291 5270 Rosid View MSA
123737666 5271 Pentapetalae View MSA
122786404 5272 Eudicot View MSA
121344768 5274 Embryophyte View MSA
123424832 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03584 0.0 5.16663   High
cufflinks 1.11157 0.0 5.30228   High
cufflinks 0.794801 0.0 3.93572    
cufflinks 0.667829 0.0 4.68987    
cufflinks 0.509448 0.0 2.59227    
cufflinks 0.377902 0.0 1.47079   Low
cufflinks 0.601731 0.0 2.88464    
cufflinks 0.721562 0.0 3.61299    
cufflinks 0.509446 0.0 2.57368    
cufflinks 0.101        
cufflinks 0.07        
cufflinks 0.174        
cufflinks 0.05     Low Low
cufflinks 0.057     Low  
cufflinks 0.073        
cufflinks 0.278        
cufflinks 0.016     Low Low
cufflinks 0.25        
cufflinks 0.256        
cufflinks 0.403       High
cufflinks 0.083        
cufflinks 0.347       High
cufflinks 0.263        
cufflinks 0.14        
cufflinks 0.302        
cufflinks 0.049     Low Low

0 Strain