Gene : Glyma.14G123900 G. max Wm82.a2.v1

Defline:  (1 of 17) PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  1239
Name:  ? Glyma.14G123900 Secondary Identifier:  ? PAC:30535181

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G123900 0.5kb upstream 0.5kb upstream 1484 true Chr14: 18813346-18814829 Glycine max
Glyma.14G123900 0.5kb upstream 0.5kb upstream 500 false Chr14: 18814330-18814829 Glycine max
Glyma.14G123900 0.5kb downstream 0.5kb downstream 1484 true Chr14: 18812846-18814329 Glycine max
Glyma.14G123900 0.5kb downstream 0.5kb downstream 500 false Chr14: 18812846-18813345 Glycine max
Glyma.14G123900 1.0kb upstream 1.0kb upstream 1984 true Chr14: 18813346-18815329 Glycine max
Glyma.14G123900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 18814330-18815329 Glycine max
Glyma.14G123900 1.0kb downstream 1.0kb downstream 1984 true Chr14: 18812346-18814329 Glycine max
Glyma.14G123900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 18812346-18813345 Glycine max
Glyma.14G123900 2.0kb upstream 2.0kb upstream 2984 true Chr14: 18813346-18816329 Glycine max
Glyma.14G123900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 18814330-18816329 Glycine max
Glyma.14G123900 2.0kb downstream 2.0kb downstream 2984 true Chr14: 18811346-18814329 Glycine max
Glyma.14G123900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 18811346-18813345 Glycine max
Glyma.14G123900 5.0kb upstream 5.0kb upstream 5984 true Chr14: 18813346-18819329 Glycine max
Glyma.14G123900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 18814330-18819329 Glycine max
Glyma.14G123900 5.0kb downstream 5.0kb downstream 5984 true Chr14: 18808346-18814329 Glycine max
Glyma.14G123900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 18808346-18813345 Glycine max
Glyma.14G123900 10.0kb upstream 10.0kb upstream 10984 true Chr14: 18813346-18824329 Glycine max
Glyma.14G123900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 18814330-18824329 Glycine max
Glyma.14G123900 10.0kb downstream 10.0kb downstream 10984 true Chr14: 18803346-18814329 Glycine max
Glyma.14G123900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 18803346-18813345 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254598 5265 Fabidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83997 0.0 6.46606   High
cufflinks 0.151752 0.0 0.604688 Low Low
cufflinks 0.228781 0.0 0.900764    
cufflinks 0.213441 0.0 0.839454    
cufflinks 0.531191 0.0 2.00152    
cufflinks 0.387476 0.0 1.48434    
cufflinks 1.24189 0.0 4.48581   High
cufflinks 0.503086 0.0 1.91023    
cufflinks 0.255029 0.0 0.995507 Low  
cufflinks 0.503        
cufflinks 0.248        
cufflinks 0.717        
cufflinks 0.889       High
cufflinks 0.668        
cufflinks 0.18        
cufflinks 0.279        
cufflinks 1.041       High
cufflinks 1.056       High
cufflinks 0.223        
cufflinks 0.302        
cufflinks 0.16       Low
cufflinks 0.21        
cufflinks 0.657        
cufflinks 0.135       Low
cufflinks 0.148       Low
cufflinks 0.19        

0 Strain