Gene : Glyma.14G109000 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG1867 - Ubiquitin-specific protease Genomic Order:  1090
Name:  ? Glyma.14G109000 Secondary Identifier:  ? PAC:30534127
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G109000 0.5kb upstream 0.5kb upstream 4529 true Chr14: 12020173-12024701 Glycine max
Glyma.14G109000 0.5kb upstream 0.5kb upstream 500 false Chr14: 12024202-12024701 Glycine max
Glyma.14G109000 0.5kb downstream 0.5kb downstream 4529 true Chr14: 12019673-12024201 Glycine max
Glyma.14G109000 0.5kb downstream 0.5kb downstream 500 false Chr14: 12019673-12020172 Glycine max
Glyma.14G109000 1.0kb upstream 1.0kb upstream 5029 true Chr14: 12020173-12025201 Glycine max
Glyma.14G109000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 12024202-12025201 Glycine max
Glyma.14G109000 1.0kb downstream 1.0kb downstream 5029 true Chr14: 12019173-12024201 Glycine max
Glyma.14G109000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 12019173-12020172 Glycine max
Glyma.14G109000 2.0kb upstream 2.0kb upstream 6029 true Chr14: 12020173-12026201 Glycine max
Glyma.14G109000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 12024202-12026201 Glycine max
Glyma.14G109000 2.0kb downstream 2.0kb downstream 6029 true Chr14: 12018173-12024201 Glycine max
Glyma.14G109000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 12018173-12020172 Glycine max
Glyma.14G109000 5.0kb upstream 5.0kb upstream 9029 true Chr14: 12020173-12029201 Glycine max
Glyma.14G109000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 12024202-12029201 Glycine max
Glyma.14G109000 5.0kb downstream 5.0kb downstream 9029 true Chr14: 12015173-12024201 Glycine max
Glyma.14G109000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 12015173-12020172 Glycine max
Glyma.14G109000 10.0kb upstream 10.0kb upstream 14029 true Chr14: 12020173-12034201 Glycine max
Glyma.14G109000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 12024202-12034201 Glycine max
Glyma.14G109000 10.0kb downstream 10.0kb downstream 14029 true Chr14: 12010173-12024201 Glycine max
Glyma.14G109000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 12010173-12020172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309334 5265 Fabidae View MSA
124070704 5270 Rosid View MSA
123736956 5271 Pentapetalae View MSA
122795648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.69857 0.0 10.1072   Low
cufflinks 3.24311 0.0 11.4928    
cufflinks 4.61072 0.0 14.9097    
cufflinks 3.03826 0.0 10.9572    
cufflinks 5.92702 0.0 19.5628   High
cufflinks 6.07687 0.0 20.1229   High
cufflinks 2.53156 0.0 9.70862   Low
cufflinks 5.1766 0.0 16.4409    
cufflinks 5.48555 0.0 18.4104    
cufflinks 1.394        
cufflinks 1.742        
cufflinks 1.456        
cufflinks 2.019       High
cufflinks 2.259       High
cufflinks 1.774        
cufflinks 0.967        
cufflinks 0.862       Low
cufflinks 1.666        
cufflinks 1.205        
cufflinks 0.756       Low
cufflinks 1.299        
cufflinks 0.959        
cufflinks 0.831       Low
cufflinks 1.822       High
cufflinks 0.769       Low
cufflinks 1.1        

0 Strain