Gene : Glyma.14G159800 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 Genomic Order:  1598
Name:  ? Glyma.14G159800 Secondary Identifier:  ? PAC:30533285
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G159800 0.5kb upstream 0.5kb upstream 10977 true Chr14: 36473317-36484293 Glycine max
Glyma.14G159800 0.5kb upstream 0.5kb upstream 500 false Chr14: 36483794-36484293 Glycine max
Glyma.14G159800 0.5kb downstream 0.5kb downstream 10977 true Chr14: 36472817-36483793 Glycine max
Glyma.14G159800 0.5kb downstream 0.5kb downstream 500 false Chr14: 36472817-36473316 Glycine max
Glyma.14G159800 1.0kb upstream 1.0kb upstream 11477 true Chr14: 36473317-36484793 Glycine max
Glyma.14G159800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 36483794-36484793 Glycine max
Glyma.14G159800 1.0kb downstream 1.0kb downstream 11477 true Chr14: 36472317-36483793 Glycine max
Glyma.14G159800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 36472317-36473316 Glycine max
Glyma.14G159800 2.0kb upstream 2.0kb upstream 12477 true Chr14: 36473317-36485793 Glycine max
Glyma.14G159800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 36483794-36485793 Glycine max
Glyma.14G159800 2.0kb downstream 2.0kb downstream 12477 true Chr14: 36471317-36483793 Glycine max
Glyma.14G159800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 36471317-36473316 Glycine max
Glyma.14G159800 5.0kb upstream 5.0kb upstream 15477 true Chr14: 36473317-36488793 Glycine max
Glyma.14G159800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 36483794-36488793 Glycine max
Glyma.14G159800 5.0kb downstream 5.0kb downstream 15477 true Chr14: 36468317-36483793 Glycine max
Glyma.14G159800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 36468317-36473316 Glycine max
Glyma.14G159800 10.0kb upstream 10.0kb upstream 20477 true Chr14: 36473317-36493793 Glycine max
Glyma.14G159800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 36483794-36493793 Glycine max
Glyma.14G159800 10.0kb downstream 10.0kb downstream 20477 true Chr14: 36463317-36483793 Glycine max
Glyma.14G159800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 36463317-36473316 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312485 5265 Fabidae View MSA
124060480 5270 Rosid View MSA
123737702 5271 Pentapetalae View MSA
122796328 5272 Eudicot View MSA
122049388 5273 Angiosperm View MSA
121345095 5274 Embryophyte View MSA
123424707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9398 0.0 53.3721    
cufflinks 19.5104 0.0 70.3219   High
cufflinks 14.6174 0.0 50.1319    
cufflinks 16.6597 0.0 63.3419    
cufflinks 15.3143 0.0 57.5419    
cufflinks 16.0516 0.0 53.8803    
cufflinks 16.2562 0.0 55.8337    
cufflinks 16.6269 0.0 62.0957    
cufflinks 12.3697 0.0 46.9122   Low
cufflinks 0.939        
cufflinks 0.526       Low
cufflinks 0.943        
cufflinks 0.974        
cufflinks 1.078        
cufflinks 0.448       Low
cufflinks 1.164        
cufflinks 0.542       Low
cufflinks 1.065        
cufflinks 1.322       High
cufflinks 1.348       High
cufflinks 0.51       Low
cufflinks 1.161        
cufflinks 1.099        
cufflinks 0.525       Low
cufflinks 1.175        
cufflinks 0.658        

0 Strain