Gene : Glyma.14G135900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0964//KOG0978//KOG4421//KOG4674 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // E3 ubiquitin ligase involved in syntaxin degradation // Uncharacterized conserved protein // Uncharacterized conserved coiled-coil protein Genomic Order:  1359
Name:  ? Glyma.14G135900 Secondary Identifier:  ? PAC:30532498
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G135900 0.5kb upstream 0.5kb upstream 12983 true Chr14: 23911516-23924498 Glycine max
Glyma.14G135900 0.5kb upstream 0.5kb upstream 500 false Chr14: 23911516-23912015 Glycine max
Glyma.14G135900 0.5kb downstream 0.5kb downstream 12983 true Chr14: 23912016-23924998 Glycine max
Glyma.14G135900 0.5kb downstream 0.5kb downstream 500 false Chr14: 23924499-23924998 Glycine max
Glyma.14G135900 1.0kb upstream 1.0kb upstream 13483 true Chr14: 23911016-23924498 Glycine max
Glyma.14G135900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 23911016-23912015 Glycine max
Glyma.14G135900 1.0kb downstream 1.0kb downstream 13483 true Chr14: 23912016-23925498 Glycine max
Glyma.14G135900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 23924499-23925498 Glycine max
Glyma.14G135900 2.0kb upstream 2.0kb upstream 14483 true Chr14: 23910016-23924498 Glycine max
Glyma.14G135900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 23910016-23912015 Glycine max
Glyma.14G135900 2.0kb downstream 2.0kb downstream 14483 true Chr14: 23912016-23926498 Glycine max
Glyma.14G135900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 23924499-23926498 Glycine max
Glyma.14G135900 5.0kb upstream 5.0kb upstream 17483 true Chr14: 23907016-23924498 Glycine max
Glyma.14G135900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 23907016-23912015 Glycine max
Glyma.14G135900 5.0kb downstream 5.0kb downstream 17483 true Chr14: 23912016-23929498 Glycine max
Glyma.14G135900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 23924499-23929498 Glycine max
Glyma.14G135900 10.0kb upstream 10.0kb upstream 22483 true Chr14: 23902016-23924498 Glycine max
Glyma.14G135900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 23902016-23912015 Glycine max
Glyma.14G135900 10.0kb downstream 10.0kb downstream 22483 true Chr14: 23912016-23934498 Glycine max
Glyma.14G135900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 23924499-23934498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309861 5265 Fabidae View MSA
124069272 5270 Rosid View MSA
123743783 5271 Pentapetalae View MSA
122794213 5272 Eudicot View MSA
122043215 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.98159 0.0 12.1342    
cufflinks 2.63722 0.0 7.92286   Low
cufflinks 5.09447 0.0 15.9506   High
cufflinks 3.39454 0.0 10.192    
cufflinks 3.48417 0.0 10.4384    
cufflinks 3.27671 0.0 9.81264    
cufflinks 2.74479 0.0 9.36343   Low
cufflinks 3.54374 0.0 10.7106    
cufflinks 3.67397 0.0 12.6894    
cufflinks 3.207        
cufflinks 4.188        
cufflinks 2.789        
cufflinks 2.873        
cufflinks 2.728        
cufflinks 6.158     High High
cufflinks 2.885        
cufflinks 1.256       Low
cufflinks 3.607        
cufflinks 2.476        
cufflinks 2.74        
cufflinks 5.196       High
cufflinks 3.104        
cufflinks 2.544        
cufflinks 3.814        
cufflinks 2.935        
cufflinks 4.3        

0 Strain