Gene : Glyma.14G188900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11361:SF81 - DNA MISMATCH REPAIR PROTEIN MUTS, TYPE 2 Genomic Order:  1889
Name:  ? Glyma.14G188900 Secondary Identifier:  ? PAC:30535222
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G188900 0.5kb upstream 0.5kb upstream 6393 true Chr14: 45348073-45354465 Glycine max
Glyma.14G188900 0.5kb upstream 0.5kb upstream 500 false Chr14: 45353966-45354465 Glycine max
Glyma.14G188900 0.5kb downstream 0.5kb downstream 6393 true Chr14: 45347573-45353965 Glycine max
Glyma.14G188900 0.5kb downstream 0.5kb downstream 500 false Chr14: 45347573-45348072 Glycine max
Glyma.14G188900 1.0kb upstream 1.0kb upstream 6893 true Chr14: 45348073-45354965 Glycine max
Glyma.14G188900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 45353966-45354965 Glycine max
Glyma.14G188900 1.0kb downstream 1.0kb downstream 6893 true Chr14: 45347073-45353965 Glycine max
Glyma.14G188900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 45347073-45348072 Glycine max
Glyma.14G188900 2.0kb upstream 2.0kb upstream 7893 true Chr14: 45348073-45355965 Glycine max
Glyma.14G188900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 45353966-45355965 Glycine max
Glyma.14G188900 2.0kb downstream 2.0kb downstream 7893 true Chr14: 45346073-45353965 Glycine max
Glyma.14G188900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 45346073-45348072 Glycine max
Glyma.14G188900 5.0kb upstream 5.0kb upstream 10893 true Chr14: 45348073-45358965 Glycine max
Glyma.14G188900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 45353966-45358965 Glycine max
Glyma.14G188900 5.0kb downstream 5.0kb downstream 10893 true Chr14: 45343073-45353965 Glycine max
Glyma.14G188900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 45343073-45348072 Glycine max
Glyma.14G188900 10.0kb upstream 10.0kb upstream 15893 true Chr14: 45348073-45363965 Glycine max
Glyma.14G188900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 45353966-45363965 Glycine max
Glyma.14G188900 10.0kb downstream 10.0kb downstream 15893 true Chr14: 45338073-45353965 Glycine max
Glyma.14G188900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 45338073-45348072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240610 5265 Fabidae Singleton cluster - no MSA
124040665 5270 Rosid View MSA
123748962 5271 Pentapetalae View MSA
122772920 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.802185 0.0 2.89258   High
cufflinks 0.921806 0.0 3.29031   High
cufflinks 0.882528 0.0 3.15299   High
cufflinks 0.277931 0.0 1.05748    
cufflinks 0.406651 0.0 1.52212    
cufflinks 0.166814 0.0 0.649005 Low Low
cufflinks 0.446975 0.0 1.6664    
cufflinks 0.313672 0.0 1.18667    
cufflinks 0.140095 0.0 0.548668 Low Low
cufflinks 0.244        
cufflinks 0.073       Low
cufflinks 0.969        
cufflinks 0.235        
cufflinks 0.315        
cufflinks 0.123        
cufflinks 1.456        
cufflinks 0.135        
cufflinks 1.626       High
cufflinks 1.092        
cufflinks 1.569       High
cufflinks 0.07       Low
cufflinks 1.618       High
cufflinks 1.619       High
cufflinks 0.075       Low
cufflinks 1.663       High
cufflinks 0.106       Low

0 Strain