Gene : Glyma.14G189900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  1899
Name:  ? Glyma.14G189900 Secondary Identifier:  ? PAC:30532666
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G189900 0.5kb upstream 0.5kb upstream 12456 true Chr14: 45470765-45483220 Glycine max
Glyma.14G189900 0.5kb upstream 0.5kb upstream 500 false Chr14: 45470765-45471264 Glycine max
Glyma.14G189900 0.5kb downstream 0.5kb downstream 12456 true Chr14: 45471265-45483720 Glycine max
Glyma.14G189900 0.5kb downstream 0.5kb downstream 500 false Chr14: 45483221-45483720 Glycine max
Glyma.14G189900 1.0kb upstream 1.0kb upstream 12956 true Chr14: 45470265-45483220 Glycine max
Glyma.14G189900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 45470265-45471264 Glycine max
Glyma.14G189900 1.0kb downstream 1.0kb downstream 12956 true Chr14: 45471265-45484220 Glycine max
Glyma.14G189900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 45483221-45484220 Glycine max
Glyma.14G189900 2.0kb upstream 2.0kb upstream 13956 true Chr14: 45469265-45483220 Glycine max
Glyma.14G189900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 45469265-45471264 Glycine max
Glyma.14G189900 2.0kb downstream 2.0kb downstream 13956 true Chr14: 45471265-45485220 Glycine max
Glyma.14G189900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 45483221-45485220 Glycine max
Glyma.14G189900 5.0kb upstream 5.0kb upstream 16956 true Chr14: 45466265-45483220 Glycine max
Glyma.14G189900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 45466265-45471264 Glycine max
Glyma.14G189900 5.0kb downstream 5.0kb downstream 16956 true Chr14: 45471265-45488220 Glycine max
Glyma.14G189900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 45483221-45488220 Glycine max
Glyma.14G189900 10.0kb upstream 10.0kb upstream 21956 true Chr14: 45461265-45483220 Glycine max
Glyma.14G189900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 45461265-45471264 Glycine max
Glyma.14G189900 10.0kb downstream 10.0kb downstream 21956 true Chr14: 45471265-45493220 Glycine max
Glyma.14G189900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 45483221-45493220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303790 5265 Fabidae View MSA
124068947 5270 Rosid View MSA
123748451 5271 Pentapetalae View MSA
122772624 5272 Eudicot View MSA
122044535 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.5226 0.0 20.0914    
cufflinks 4.88146 0.0 13.2471    
cufflinks 3.44991 0.0 9.59373   Low
cufflinks 9.70212 0.0 25.9022   High
cufflinks 7.47158 0.0 19.9564    
cufflinks 4.76101 0.0 12.9305    
cufflinks 7.92023 0.0 21.1408    
cufflinks 6.62142 0.0 17.7222    
cufflinks 4.99826 0.0 13.5374    
cufflinks 2.782       High
cufflinks 2.588        
cufflinks 1.661        
cufflinks 2.296        
cufflinks 2.86       High
cufflinks 1.416        
cufflinks 1.319       Low
cufflinks 2.358        
cufflinks 1.943        
cufflinks 2.483        
cufflinks 1.144       Low
cufflinks 1.815        
cufflinks 1.368       Low
cufflinks 1.602        
cufflinks 3.024       High
cufflinks 1.135       Low
cufflinks 2.651        

0 Strain