Gene : Glyma.14G184500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  1845
Name:  ? Glyma.14G184500 Secondary Identifier:  ? PAC:30533297
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYSYN-PWY Glycine max pathologic  
Gmax PWY-2161 Glycine max pathologic  
Gmax PWY-3841 Glycine max pathologic  
Gmax SER-GLYSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G184500 0.5kb upstream 0.5kb upstream 8052 true Chr14: 44787773-44795824 Glycine max
Glyma.14G184500 0.5kb upstream 0.5kb upstream 500 false Chr14: 44787773-44788272 Glycine max
Glyma.14G184500 0.5kb downstream 0.5kb downstream 8052 true Chr14: 44788273-44796324 Glycine max
Glyma.14G184500 0.5kb downstream 0.5kb downstream 500 false Chr14: 44795825-44796324 Glycine max
Glyma.14G184500 1.0kb upstream 1.0kb upstream 8552 true Chr14: 44787273-44795824 Glycine max
Glyma.14G184500 1.0kb upstream 1.0kb upstream 1000 false Chr14: 44787273-44788272 Glycine max
Glyma.14G184500 1.0kb downstream 1.0kb downstream 8552 true Chr14: 44788273-44796824 Glycine max
Glyma.14G184500 1.0kb downstream 1.0kb downstream 1000 false Chr14: 44795825-44796824 Glycine max
Glyma.14G184500 2.0kb upstream 2.0kb upstream 9552 true Chr14: 44786273-44795824 Glycine max
Glyma.14G184500 2.0kb upstream 2.0kb upstream 2000 false Chr14: 44786273-44788272 Glycine max
Glyma.14G184500 2.0kb downstream 2.0kb downstream 9552 true Chr14: 44788273-44797824 Glycine max
Glyma.14G184500 2.0kb downstream 2.0kb downstream 2000 false Chr14: 44795825-44797824 Glycine max
Glyma.14G184500 5.0kb upstream 5.0kb upstream 12552 true Chr14: 44783273-44795824 Glycine max
Glyma.14G184500 5.0kb upstream 5.0kb upstream 5000 false Chr14: 44783273-44788272 Glycine max
Glyma.14G184500 5.0kb downstream 5.0kb downstream 12552 true Chr14: 44788273-44800824 Glycine max
Glyma.14G184500 5.0kb downstream 5.0kb downstream 5000 false Chr14: 44795825-44800824 Glycine max
Glyma.14G184500 10.0kb upstream 10.0kb upstream 17552 true Chr14: 44778273-44795824 Glycine max
Glyma.14G184500 10.0kb upstream 10.0kb upstream 10000 false Chr14: 44778273-44788272 Glycine max
Glyma.14G184500 10.0kb downstream 10.0kb downstream 17552 true Chr14: 44788273-44805824 Glycine max
Glyma.14G184500 10.0kb downstream 10.0kb downstream 10000 false Chr14: 44795825-44805824 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314119 5265 Fabidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.9777 0.0 184.661 High  
cufflinks 39.952 0.0 322.078 High  
cufflinks 23.2043 0.0 172.208 High  
cufflinks 70.8982 0.0 728.907 High High
cufflinks 49.3168 0.0 419.975 High  
cufflinks 25.7111 0.0 193.594 High  
cufflinks 18.1214 0.0 135.488   Low
cufflinks 79.5199 0.0 862.435 High High
cufflinks 31.9049 0.0 253.626 High  
cufflinks 3.658       High
cufflinks 0.616       Low
cufflinks 1.426        
cufflinks 2.825       High
cufflinks 2.836       High
cufflinks 0.951       Low
cufflinks 1.835        
cufflinks 1.393        
cufflinks 2.033        
cufflinks 2.859       High
cufflinks 1.39        
cufflinks 1.191        
cufflinks 1.673        
cufflinks 1.728        
cufflinks 0.997       Low
cufflinks 1.588        
cufflinks 1.722        

0 Strain