Gene : Glyma.14G173500 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1735
Name:  ? Glyma.14G173500 Secondary Identifier:  ? PAC:30532209
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G173500 0.5kb upstream 0.5kb upstream 2577 true Chr14: 42910650-42913226 Glycine max
Glyma.14G173500 0.5kb upstream 0.5kb upstream 500 false Chr14: 42910650-42911149 Glycine max
Glyma.14G173500 0.5kb downstream 0.5kb downstream 2577 true Chr14: 42911150-42913726 Glycine max
Glyma.14G173500 0.5kb downstream 0.5kb downstream 500 false Chr14: 42913227-42913726 Glycine max
Glyma.14G173500 1.0kb upstream 1.0kb upstream 3077 true Chr14: 42910150-42913226 Glycine max
Glyma.14G173500 1.0kb upstream 1.0kb upstream 1000 false Chr14: 42910150-42911149 Glycine max
Glyma.14G173500 1.0kb downstream 1.0kb downstream 3077 true Chr14: 42911150-42914226 Glycine max
Glyma.14G173500 1.0kb downstream 1.0kb downstream 1000 false Chr14: 42913227-42914226 Glycine max
Glyma.14G173500 2.0kb upstream 2.0kb upstream 4077 true Chr14: 42909150-42913226 Glycine max
Glyma.14G173500 2.0kb upstream 2.0kb upstream 2000 false Chr14: 42909150-42911149 Glycine max
Glyma.14G173500 2.0kb downstream 2.0kb downstream 4077 true Chr14: 42911150-42915226 Glycine max
Glyma.14G173500 2.0kb downstream 2.0kb downstream 2000 false Chr14: 42913227-42915226 Glycine max
Glyma.14G173500 5.0kb upstream 5.0kb upstream 7077 true Chr14: 42906150-42913226 Glycine max
Glyma.14G173500 5.0kb upstream 5.0kb upstream 5000 false Chr14: 42906150-42911149 Glycine max
Glyma.14G173500 5.0kb downstream 5.0kb downstream 7077 true Chr14: 42911150-42918226 Glycine max
Glyma.14G173500 5.0kb downstream 5.0kb downstream 5000 false Chr14: 42913227-42918226 Glycine max
Glyma.14G173500 10.0kb upstream 10.0kb upstream 12077 true Chr14: 42901150-42913226 Glycine max
Glyma.14G173500 10.0kb upstream 10.0kb upstream 10000 false Chr14: 42901150-42911149 Glycine max
Glyma.14G173500 10.0kb downstream 10.0kb downstream 12077 true Chr14: 42911150-42923226 Glycine max
Glyma.14G173500 10.0kb downstream 10.0kb downstream 10000 false Chr14: 42913227-42923226 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250366 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.45655 0.0 1.77336    
cufflinks 0.350182 0.0 1.37435    
cufflinks 0.954141 0.0 3.58069    
cufflinks 1.92521 0.0 6.96711   High
cufflinks 0.135048 0.0 0.54952 Low  
cufflinks 0.0392849 0.0 0.174932 Low  
cufflinks 0.00355945 0.0 0.0246879 Low Low
cufflinks 0.204536 0.0 0.817502 Low  
cufflinks 0.0635799 0.0 0.271835 Low  
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.024     Low  
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.058     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.038     Low  

0 Strain