Gene : Glyma.14G174200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  1742
Name:  ? Glyma.14G174200 Secondary Identifier:  ? PAC:30535198
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G174200 0.5kb upstream 0.5kb upstream 6300 true Chr14: 42984199-42990498 Glycine max
Glyma.14G174200 0.5kb upstream 0.5kb upstream 500 false Chr14: 42984199-42984698 Glycine max
Glyma.14G174200 0.5kb downstream 0.5kb downstream 6300 true Chr14: 42984699-42990998 Glycine max
Glyma.14G174200 0.5kb downstream 0.5kb downstream 500 false Chr14: 42990499-42990998 Glycine max
Glyma.14G174200 1.0kb upstream 1.0kb upstream 6800 true Chr14: 42983699-42990498 Glycine max
Glyma.14G174200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 42983699-42984698 Glycine max
Glyma.14G174200 1.0kb downstream 1.0kb downstream 6800 true Chr14: 42984699-42991498 Glycine max
Glyma.14G174200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 42990499-42991498 Glycine max
Glyma.14G174200 2.0kb upstream 2.0kb upstream 7800 true Chr14: 42982699-42990498 Glycine max
Glyma.14G174200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 42982699-42984698 Glycine max
Glyma.14G174200 2.0kb downstream 2.0kb downstream 7800 true Chr14: 42984699-42992498 Glycine max
Glyma.14G174200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 42990499-42992498 Glycine max
Glyma.14G174200 5.0kb upstream 5.0kb upstream 10800 true Chr14: 42979699-42990498 Glycine max
Glyma.14G174200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 42979699-42984698 Glycine max
Glyma.14G174200 5.0kb downstream 5.0kb downstream 10800 true Chr14: 42984699-42995498 Glycine max
Glyma.14G174200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 42990499-42995498 Glycine max
Glyma.14G174200 10.0kb upstream 10.0kb upstream 15800 true Chr14: 42974699-42990498 Glycine max
Glyma.14G174200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 42974699-42984698 Glycine max
Glyma.14G174200 10.0kb downstream 10.0kb downstream 15800 true Chr14: 42984699-43000498 Glycine max
Glyma.14G174200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 42990499-43000498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314673 5265 Fabidae View MSA
124068248 5270 Rosid View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4108 0.0 69.4488   High
cufflinks 9.61821 0.0 33.095    
cufflinks 9.22407 0.0 31.8334    
cufflinks 14.16 0.0 49.6612    
cufflinks 4.33224 0.0 15.9527   Low
cufflinks 9.45996 0.0 32.6246    
cufflinks 4.65938 0.0 14.7861   Low
cufflinks 14.6728 0.0 51.6425    
cufflinks 3.57446 0.0 13.7136   Low
cufflinks 5.778        
cufflinks 0.383       Low
cufflinks 3.18        
cufflinks 1.767        
cufflinks 0.796        
cufflinks 0.52       Low
cufflinks 10.587     High High
cufflinks 2.863        
cufflinks 2.953        
cufflinks 4.996        
cufflinks 10.993     High High
cufflinks 0.332       Low
cufflinks 11.201     High High
cufflinks 7.3        
cufflinks 0.385       Low
cufflinks 11.679     High High
cufflinks 0.965        

0 Strain