Gene : Glyma.14G178900 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  1789
Name:  ? Glyma.14G178900 Secondary Identifier:  ? PAC:30533194
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6124 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G178900 0.5kb upstream 0.5kb upstream 7003 true Chr14: 44007297-44014299 Glycine max
Glyma.14G178900 0.5kb upstream 0.5kb upstream 500 false Chr14: 44013800-44014299 Glycine max
Glyma.14G178900 0.5kb downstream 0.5kb downstream 7003 true Chr14: 44006797-44013799 Glycine max
Glyma.14G178900 0.5kb downstream 0.5kb downstream 500 false Chr14: 44006797-44007296 Glycine max
Glyma.14G178900 1.0kb upstream 1.0kb upstream 7503 true Chr14: 44007297-44014799 Glycine max
Glyma.14G178900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 44013800-44014799 Glycine max
Glyma.14G178900 1.0kb downstream 1.0kb downstream 7503 true Chr14: 44006297-44013799 Glycine max
Glyma.14G178900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 44006297-44007296 Glycine max
Glyma.14G178900 2.0kb upstream 2.0kb upstream 8503 true Chr14: 44007297-44015799 Glycine max
Glyma.14G178900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 44013800-44015799 Glycine max
Glyma.14G178900 2.0kb downstream 2.0kb downstream 8503 true Chr14: 44005297-44013799 Glycine max
Glyma.14G178900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 44005297-44007296 Glycine max
Glyma.14G178900 5.0kb upstream 5.0kb upstream 11503 true Chr14: 44007297-44018799 Glycine max
Glyma.14G178900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 44013800-44018799 Glycine max
Glyma.14G178900 5.0kb downstream 5.0kb downstream 11503 true Chr14: 44002297-44013799 Glycine max
Glyma.14G178900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 44002297-44007296 Glycine max
Glyma.14G178900 10.0kb upstream 10.0kb upstream 16503 true Chr14: 44007297-44023799 Glycine max
Glyma.14G178900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 44013800-44023799 Glycine max
Glyma.14G178900 10.0kb downstream 10.0kb downstream 16503 true Chr14: 43997297-44013799 Glycine max
Glyma.14G178900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 43997297-44007296 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301932 5265 Fabidae View MSA
124065715 5270 Rosid View MSA
123739359 5271 Pentapetalae View MSA
122791298 5272 Eudicot View MSA
122044442 5273 Angiosperm View MSA
121346335 5274 Embryophyte View MSA
123424061 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5312 0.0 40.958    
cufflinks 6.14818 0.0 21.3074    
cufflinks 2.89304 0.0 9.62588   Low
cufflinks 7.3205 0.0 24.2637    
cufflinks 24.5536 0.0 87.2893 High  
cufflinks 8.15437 0.0 26.4133    
cufflinks 7.27912 0.0 24.136    
cufflinks 9.5023 0.0 35.0077    
cufflinks 64.9334 0.0 229.62 High High
cufflinks 0.666        
cufflinks 0.985        
cufflinks 0.498        
cufflinks 1.122        
cufflinks 1.264        
cufflinks 4.182       High
cufflinks 0.284        
cufflinks 0.612        
cufflinks 0.42        
cufflinks 0.622        
cufflinks 0.191       Low
cufflinks 1.094        
cufflinks 0.233       Low
cufflinks 0.263       Low
cufflinks 0.925        
cufflinks 0.248       Low
cufflinks 0.808        

0 Strain