Gene : Glyma.14G179200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22778//PTHR22778:SF19 - OVARIAN CANCER GENE-2 PROTEIN-RELATED Genomic Order:  1792
Name:  ? Glyma.14G179200 Secondary Identifier:  ? PAC:30532119
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G179200 0.5kb upstream 0.5kb upstream 3421 true Chr14: 44060302-44063722 Glycine max
Glyma.14G179200 0.5kb upstream 0.5kb upstream 500 false Chr14: 44060302-44060801 Glycine max
Glyma.14G179200 0.5kb downstream 0.5kb downstream 3421 true Chr14: 44060802-44064222 Glycine max
Glyma.14G179200 0.5kb downstream 0.5kb downstream 500 false Chr14: 44063723-44064222 Glycine max
Glyma.14G179200 1.0kb upstream 1.0kb upstream 3921 true Chr14: 44059802-44063722 Glycine max
Glyma.14G179200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 44059802-44060801 Glycine max
Glyma.14G179200 1.0kb downstream 1.0kb downstream 3921 true Chr14: 44060802-44064722 Glycine max
Glyma.14G179200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 44063723-44064722 Glycine max
Glyma.14G179200 2.0kb upstream 2.0kb upstream 4921 true Chr14: 44058802-44063722 Glycine max
Glyma.14G179200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 44058802-44060801 Glycine max
Glyma.14G179200 2.0kb downstream 2.0kb downstream 4921 true Chr14: 44060802-44065722 Glycine max
Glyma.14G179200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 44063723-44065722 Glycine max
Glyma.14G179200 5.0kb upstream 5.0kb upstream 7921 true Chr14: 44055802-44063722 Glycine max
Glyma.14G179200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 44055802-44060801 Glycine max
Glyma.14G179200 5.0kb downstream 5.0kb downstream 7921 true Chr14: 44060802-44068722 Glycine max
Glyma.14G179200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 44063723-44068722 Glycine max
Glyma.14G179200 10.0kb upstream 10.0kb upstream 12921 true Chr14: 44050802-44063722 Glycine max
Glyma.14G179200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 44050802-44060801 Glycine max
Glyma.14G179200 10.0kb downstream 10.0kb downstream 12921 true Chr14: 44060802-44073722 Glycine max
Glyma.14G179200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 44063723-44073722 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311254 5265 Fabidae View MSA
124064450 5270 Rosid View MSA
123736447 5271 Pentapetalae View MSA
122793262 5272 Eudicot View MSA
122046471 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.7539 0.0 74.3968   High
cufflinks 0.0979323 0.0 0.395838 Low Low
cufflinks 5.43539 0.0 23.4877    
cufflinks 1.05292 0.0 6.48395    
cufflinks 2.26397 0.0 12.541    
cufflinks 31.6469 0.0 106.953 High High
cufflinks 0.557366 0.0 3.80969    
cufflinks 2.91982 0.0 14.942    
cufflinks 3.92832 0.0 17.5338    
cufflinks 16.016     High  
cufflinks 9.287     High  
cufflinks 2.578        
cufflinks 3.889        
cufflinks 0.354       Low
cufflinks 13.378     High  
cufflinks 0.45        
cufflinks 102.68     High High
cufflinks 3.531        
cufflinks 0.292       Low
cufflinks 0.153       Low
cufflinks 6.061     High  
cufflinks 0.366       Low
cufflinks 3.641        
cufflinks 4.717        
cufflinks 0.252       Low
cufflinks 17.548     High High

0 Strain