Gene : Glyma.14G171100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR17985 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  1711
Name:  ? Glyma.14G171100 Secondary Identifier:  ? PAC:30534841
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G171100 0.5kb upstream 0.5kb upstream 7205 true Chr14: 42357087-42364291 Glycine max
Glyma.14G171100 0.5kb upstream 0.5kb upstream 500 false Chr14: 42363792-42364291 Glycine max
Glyma.14G171100 0.5kb downstream 0.5kb downstream 7205 true Chr14: 42356587-42363791 Glycine max
Glyma.14G171100 0.5kb downstream 0.5kb downstream 500 false Chr14: 42356587-42357086 Glycine max
Glyma.14G171100 1.0kb upstream 1.0kb upstream 7705 true Chr14: 42357087-42364791 Glycine max
Glyma.14G171100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 42363792-42364791 Glycine max
Glyma.14G171100 1.0kb downstream 1.0kb downstream 7705 true Chr14: 42356087-42363791 Glycine max
Glyma.14G171100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 42356087-42357086 Glycine max
Glyma.14G171100 2.0kb upstream 2.0kb upstream 8705 true Chr14: 42357087-42365791 Glycine max
Glyma.14G171100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 42363792-42365791 Glycine max
Glyma.14G171100 2.0kb downstream 2.0kb downstream 8705 true Chr14: 42355087-42363791 Glycine max
Glyma.14G171100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 42355087-42357086 Glycine max
Glyma.14G171100 5.0kb upstream 5.0kb upstream 11705 true Chr14: 42357087-42368791 Glycine max
Glyma.14G171100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 42363792-42368791 Glycine max
Glyma.14G171100 5.0kb downstream 5.0kb downstream 11705 true Chr14: 42352087-42363791 Glycine max
Glyma.14G171100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 42352087-42357086 Glycine max
Glyma.14G171100 10.0kb upstream 10.0kb upstream 16705 true Chr14: 42357087-42373791 Glycine max
Glyma.14G171100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 42363792-42373791 Glycine max
Glyma.14G171100 10.0kb downstream 10.0kb downstream 16705 true Chr14: 42347087-42363791 Glycine max
Glyma.14G171100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 42347087-42357086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240666 5265 Fabidae Singleton cluster - no MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0550687 0.0 0.224339 Low  
cufflinks 0.876362 0.0 3.14991   High
cufflinks 0.269418 0.0 1.02689    
cufflinks 0.0218172 0.0 0.0945025 Low  
cufflinks 0.673745 0.0 2.46667   High
cufflinks 0.352769 0.0 1.33162    
cufflinks 0.0122727 0.0 0.0562114 Low Low
cufflinks 0.0134787 0.0 0.0610042 Low Low
cufflinks 0.391741 0.0 1.47174    
cufflinks 0.011     Low Low
cufflinks 194.829     High High
cufflinks 0.119     Low  
cufflinks 0.014     Low Low
cufflinks 0.137        
cufflinks 218.42     High High
cufflinks 0.066     Low  
cufflinks 1.098        
cufflinks 0.405        
cufflinks 0.258        
cufflinks 0.041     Low  
cufflinks 147.925     High High
cufflinks 0.048     Low  
cufflinks 0.09     Low  
cufflinks 44.98     High High
cufflinks 0.045     Low  
cufflinks 32.661     High High

0 Strain