Gene : Glyma.14G171700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Genomic Order:  1717
Name:  ? Glyma.14G171700 Secondary Identifier:  ? PAC:30531818
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G171700 0.5kb upstream 0.5kb upstream 3489 true Chr14: 42494827-42498315 Glycine max
Glyma.14G171700 0.5kb upstream 0.5kb upstream 500 false Chr14: 42497816-42498315 Glycine max
Glyma.14G171700 0.5kb downstream 0.5kb downstream 3489 true Chr14: 42494327-42497815 Glycine max
Glyma.14G171700 0.5kb downstream 0.5kb downstream 500 false Chr14: 42494327-42494826 Glycine max
Glyma.14G171700 1.0kb upstream 1.0kb upstream 3989 true Chr14: 42494827-42498815 Glycine max
Glyma.14G171700 1.0kb upstream 1.0kb upstream 1000 false Chr14: 42497816-42498815 Glycine max
Glyma.14G171700 1.0kb downstream 1.0kb downstream 3989 true Chr14: 42493827-42497815 Glycine max
Glyma.14G171700 1.0kb downstream 1.0kb downstream 1000 false Chr14: 42493827-42494826 Glycine max
Glyma.14G171700 2.0kb upstream 2.0kb upstream 4989 true Chr14: 42494827-42499815 Glycine max
Glyma.14G171700 2.0kb upstream 2.0kb upstream 2000 false Chr14: 42497816-42499815 Glycine max
Glyma.14G171700 2.0kb downstream 2.0kb downstream 4989 true Chr14: 42492827-42497815 Glycine max
Glyma.14G171700 2.0kb downstream 2.0kb downstream 2000 false Chr14: 42492827-42494826 Glycine max
Glyma.14G171700 5.0kb upstream 5.0kb upstream 7989 true Chr14: 42494827-42502815 Glycine max
Glyma.14G171700 5.0kb upstream 5.0kb upstream 5000 false Chr14: 42497816-42502815 Glycine max
Glyma.14G171700 5.0kb downstream 5.0kb downstream 7989 true Chr14: 42489827-42497815 Glycine max
Glyma.14G171700 5.0kb downstream 5.0kb downstream 5000 false Chr14: 42489827-42494826 Glycine max
Glyma.14G171700 10.0kb upstream 10.0kb upstream 12989 true Chr14: 42494827-42507815 Glycine max
Glyma.14G171700 10.0kb upstream 10.0kb upstream 10000 false Chr14: 42497816-42507815 Glycine max
Glyma.14G171700 10.0kb downstream 10.0kb downstream 12989 true Chr14: 42484827-42497815 Glycine max
Glyma.14G171700 10.0kb downstream 10.0kb downstream 10000 false Chr14: 42484827-42494826 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297464 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17195 0.0 7.11276    
cufflinks 0.744799 0.0 2.6983    
cufflinks 18.4014 0.0 49.0927   High
cufflinks 0.173464 0.0 0.67371 Low Low
cufflinks 0.851926 0.0 3.06034    
cufflinks 0.169412 0.0 0.659116 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.87097 0.0 9.02219    
cufflinks 1.30383 0.0 4.52755    
cufflinks 3.541        
cufflinks 4.804        
cufflinks 10.64     High High
cufflinks 0.422        
cufflinks 0.275       Low
cufflinks 0.522        
cufflinks 0.588        
cufflinks 41.108     High High
cufflinks 1.661        
cufflinks 1.672        
cufflinks 0.41        
cufflinks 4.13        
cufflinks 0.536        
cufflinks 0.294       Low
cufflinks 6.755     High  
cufflinks 0.652        
cufflinks 11.497     High High

0 Strain