Gene : Glyma.14G217300 G. max Wm82.a2.v1
Defline:  (1 of 7) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  2173
Name:  ? Glyma.14G217300 Secondary Identifier:  ? PAC:30534545
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax LEUSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G217300 0.5kb upstream 0.5kb upstream 8826 true Chr14: 48215760-48224585 Glycine max
Glyma.14G217300 0.5kb upstream 0.5kb upstream 500 false Chr14: 48224086-48224585 Glycine max
Glyma.14G217300 0.5kb downstream 0.5kb downstream 8826 true Chr14: 48215260-48224085 Glycine max
Glyma.14G217300 0.5kb downstream 0.5kb downstream 500 false Chr14: 48215260-48215759 Glycine max
Glyma.14G217300 1.0kb upstream 1.0kb upstream 9326 true Chr14: 48215760-48225085 Glycine max
Glyma.14G217300 1.0kb upstream 1.0kb upstream 1000 false Chr14: 48224086-48225085 Glycine max
Glyma.14G217300 1.0kb downstream 1.0kb downstream 9326 true Chr14: 48214760-48224085 Glycine max
Glyma.14G217300 1.0kb downstream 1.0kb downstream 1000 false Chr14: 48214760-48215759 Glycine max
Glyma.14G217300 2.0kb upstream 2.0kb upstream 10326 true Chr14: 48215760-48226085 Glycine max
Glyma.14G217300 2.0kb upstream 2.0kb upstream 2000 false Chr14: 48224086-48226085 Glycine max
Glyma.14G217300 2.0kb downstream 2.0kb downstream 10326 true Chr14: 48213760-48224085 Glycine max
Glyma.14G217300 2.0kb downstream 2.0kb downstream 2000 false Chr14: 48213760-48215759 Glycine max
Glyma.14G217300 5.0kb upstream 5.0kb upstream 13326 true Chr14: 48215760-48229085 Glycine max
Glyma.14G217300 5.0kb upstream 5.0kb upstream 5000 false Chr14: 48224086-48229085 Glycine max
Glyma.14G217300 5.0kb downstream 5.0kb downstream 13326 true Chr14: 48210760-48224085 Glycine max
Glyma.14G217300 5.0kb downstream 5.0kb downstream 5000 false Chr14: 48210760-48215759 Glycine max
Glyma.14G217300 10.0kb upstream 10.0kb upstream 18326 true Chr14: 48215760-48234085 Glycine max
Glyma.14G217300 10.0kb upstream 10.0kb upstream 10000 false Chr14: 48224086-48234085 Glycine max
Glyma.14G217300 10.0kb downstream 10.0kb downstream 18326 true Chr14: 48205760-48224085 Glycine max
Glyma.14G217300 10.0kb downstream 10.0kb downstream 10000 false Chr14: 48205760-48215759 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303896 5265 Fabidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.3748 0.0 59.9494 High  
cufflinks 27.6001 0.0 74.6024 High  
cufflinks 18.5901 0.0 49.6339   Low
cufflinks 22.4393 0.0 60.14 High  
cufflinks 28.0164 0.0 75.7873 High  
cufflinks 20.9441 0.0 56.0311    
cufflinks 37.7291 0.0 104.297 High High
cufflinks 22.6269 0.0 60.6656 High  
cufflinks 17.9939 0.0 48.0199   Low
cufflinks 3.937        
cufflinks 1.542       Low
cufflinks 4.382        
cufflinks 5.598        
cufflinks 6.966     High High
cufflinks 1.788       Low
cufflinks 5.127        
cufflinks 2.291        
cufflinks 5.162        
cufflinks 5.362        
cufflinks 5.127        
cufflinks 2.07       Low
cufflinks 5.16        
cufflinks 4.872        
cufflinks 1.989       Low
cufflinks 5.253        
cufflinks 2.56        

0 Strain