Gene : Glyma.14G197800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  1978
Name:  ? Glyma.14G197800 Secondary Identifier:  ? PAC:30531736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G197800 0.5kb upstream 0.5kb upstream 5735 true Chr14: 46303186-46308920 Glycine max
Glyma.14G197800 0.5kb upstream 0.5kb upstream 500 false Chr14: 46303186-46303685 Glycine max
Glyma.14G197800 0.5kb downstream 0.5kb downstream 5735 true Chr14: 46303686-46309420 Glycine max
Glyma.14G197800 0.5kb downstream 0.5kb downstream 500 false Chr14: 46308921-46309420 Glycine max
Glyma.14G197800 1.0kb upstream 1.0kb upstream 6235 true Chr14: 46302686-46308920 Glycine max
Glyma.14G197800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 46302686-46303685 Glycine max
Glyma.14G197800 1.0kb downstream 1.0kb downstream 6235 true Chr14: 46303686-46309920 Glycine max
Glyma.14G197800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 46308921-46309920 Glycine max
Glyma.14G197800 2.0kb upstream 2.0kb upstream 7235 true Chr14: 46301686-46308920 Glycine max
Glyma.14G197800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 46301686-46303685 Glycine max
Glyma.14G197800 2.0kb downstream 2.0kb downstream 7235 true Chr14: 46303686-46310920 Glycine max
Glyma.14G197800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 46308921-46310920 Glycine max
Glyma.14G197800 5.0kb upstream 5.0kb upstream 10235 true Chr14: 46298686-46308920 Glycine max
Glyma.14G197800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 46298686-46303685 Glycine max
Glyma.14G197800 5.0kb downstream 5.0kb downstream 10235 true Chr14: 46303686-46313920 Glycine max
Glyma.14G197800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 46308921-46313920 Glycine max
Glyma.14G197800 10.0kb upstream 10.0kb upstream 15235 true Chr14: 46293686-46308920 Glycine max
Glyma.14G197800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 46293686-46303685 Glycine max
Glyma.14G197800 10.0kb downstream 10.0kb downstream 15235 true Chr14: 46303686-46318920 Glycine max
Glyma.14G197800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 46308921-46318920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
122299801 5265 Fabidae View MSA
124060836 5270 Rosid View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.24166 0.0 7.3222    
cufflinks 3.26067 0.0 10.1485    
cufflinks 1.48225 0.0 5.13745   Low
cufflinks 3.00649 0.0 9.45728    
cufflinks 2.3644 0.0 7.60217    
cufflinks 1.33066 0.0 4.61546   Low
cufflinks 4.77031 0.0 13.9591   High
cufflinks 2.80532 0.0 8.93273    
cufflinks 2.05231 0.0 6.78734    
cufflinks 0.581        
cufflinks 0.114       Low
cufflinks 0.288        
cufflinks 0.436        
cufflinks 0.571        
cufflinks 0.2        
cufflinks 0.755        
cufflinks 0.164       Low
cufflinks 0.487        
cufflinks 0.645        
cufflinks 0.867       High
cufflinks 0.138       Low
cufflinks 0.765        
cufflinks 0.799       High
cufflinks 0.114       Low
cufflinks 0.788       High
cufflinks 0.175        

0 Strain