Gene : Glyma.14G199000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  1990
Name:  ? Glyma.14G199000 Secondary Identifier:  ? PAC:30535206
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G199000 0.5kb upstream 0.5kb upstream 7422 true Chr14: 46412531-46419952 Glycine max
Glyma.14G199000 0.5kb upstream 0.5kb upstream 500 false Chr14: 46412531-46413030 Glycine max
Glyma.14G199000 0.5kb downstream 0.5kb downstream 7422 true Chr14: 46413031-46420452 Glycine max
Glyma.14G199000 0.5kb downstream 0.5kb downstream 500 false Chr14: 46419953-46420452 Glycine max
Glyma.14G199000 1.0kb upstream 1.0kb upstream 7922 true Chr14: 46412031-46419952 Glycine max
Glyma.14G199000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 46412031-46413030 Glycine max
Glyma.14G199000 1.0kb downstream 1.0kb downstream 7922 true Chr14: 46413031-46420952 Glycine max
Glyma.14G199000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 46419953-46420952 Glycine max
Glyma.14G199000 2.0kb upstream 2.0kb upstream 8922 true Chr14: 46411031-46419952 Glycine max
Glyma.14G199000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 46411031-46413030 Glycine max
Glyma.14G199000 2.0kb downstream 2.0kb downstream 8922 true Chr14: 46413031-46421952 Glycine max
Glyma.14G199000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 46419953-46421952 Glycine max
Glyma.14G199000 5.0kb upstream 5.0kb upstream 11922 true Chr14: 46408031-46419952 Glycine max
Glyma.14G199000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 46408031-46413030 Glycine max
Glyma.14G199000 5.0kb downstream 5.0kb downstream 11922 true Chr14: 46413031-46424952 Glycine max
Glyma.14G199000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 46419953-46424952 Glycine max
Glyma.14G199000 10.0kb upstream 10.0kb upstream 16922 true Chr14: 46403031-46419952 Glycine max
Glyma.14G199000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 46403031-46413030 Glycine max
Glyma.14G199000 10.0kb downstream 10.0kb downstream 16922 true Chr14: 46413031-46429952 Glycine max
Glyma.14G199000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 46419953-46429952 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122306330 5265 Fabidae View MSA
124063344 5270 Rosid View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.3591 0.0 29.0993    
cufflinks 6.68256 0.0 24.0066    
cufflinks 8.54884 0.0 30.0168    
cufflinks 9.8502 0.0 38.2396    
cufflinks 7.27998 0.0 25.7224    
cufflinks 4.87928 0.0 18.3659   Low
cufflinks 10.2554 0.0 35.3518   High
cufflinks 9.29134 0.0 32.2205    
cufflinks 6.47283 0.0 23.226    
cufflinks 0.548        
cufflinks 0.33       Low
cufflinks 0.682        
cufflinks 0.687        
cufflinks 0.621        
cufflinks 0.446        
cufflinks 0.822       High
cufflinks 0.328       Low
cufflinks 0.583        
cufflinks 0.585        
cufflinks 0.858       High
cufflinks 0.436        
cufflinks 0.802       High
cufflinks 0.512        
cufflinks 0.469        
cufflinks 0.843       High
cufflinks 0.455        

0 Strain