Gene : Glyma.15G015900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11886//PTHR11886:SF47 - DYNEIN LIGHT CHAIN Genomic Order:  159
Name:  ? Glyma.15G015900 Secondary Identifier:  ? PAC:30495930
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G015900 0.5kb upstream 0.5kb upstream 1874 true Chr15: 1257971-1259844 Glycine max
Glyma.15G015900 0.5kb upstream 0.5kb upstream 500 false Chr15: 1257971-1258470 Glycine max
Glyma.15G015900 0.5kb downstream 0.5kb downstream 1874 true Chr15: 1258471-1260344 Glycine max
Glyma.15G015900 0.5kb downstream 0.5kb downstream 500 false Chr15: 1259845-1260344 Glycine max
Glyma.15G015900 1.0kb upstream 1.0kb upstream 2374 true Chr15: 1257471-1259844 Glycine max
Glyma.15G015900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1257471-1258470 Glycine max
Glyma.15G015900 1.0kb downstream 1.0kb downstream 2374 true Chr15: 1258471-1260844 Glycine max
Glyma.15G015900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1259845-1260844 Glycine max
Glyma.15G015900 2.0kb upstream 2.0kb upstream 3374 true Chr15: 1256471-1259844 Glycine max
Glyma.15G015900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1256471-1258470 Glycine max
Glyma.15G015900 2.0kb downstream 2.0kb downstream 3374 true Chr15: 1258471-1261844 Glycine max
Glyma.15G015900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1259845-1261844 Glycine max
Glyma.15G015900 5.0kb upstream 5.0kb upstream 6374 true Chr15: 1253471-1259844 Glycine max
Glyma.15G015900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1253471-1258470 Glycine max
Glyma.15G015900 5.0kb downstream 5.0kb downstream 6374 true Chr15: 1258471-1264844 Glycine max
Glyma.15G015900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1259845-1264844 Glycine max
Glyma.15G015900 10.0kb upstream 10.0kb upstream 11374 true Chr15: 1248471-1259844 Glycine max
Glyma.15G015900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1248471-1258470 Glycine max
Glyma.15G015900 10.0kb downstream 10.0kb downstream 11374 true Chr15: 1258471-1269844 Glycine max
Glyma.15G015900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1259845-1269844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302657 5265 Fabidae View MSA
124072980 5270 Rosid View MSA
123740805 5271 Pentapetalae View MSA
122787832 5272 Eudicot View MSA
122043951 5273 Angiosperm View MSA
121349084 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.432355 0.0 1.65111   Low
cufflinks 4.54153 0.0 14.4017    
cufflinks 22.6179 0.0 60.623 High High
cufflinks 6.71672 0.0 20.1021    
cufflinks 6.07262 0.0 18.5225    
cufflinks 11.555 0.0 32.4424    
cufflinks 5.52058 0.0 17.067    
cufflinks 1.75218 0.0 6.19652    
cufflinks 9.2901 0.0 26.7035    
cufflinks 1.908        
cufflinks 2.47        
cufflinks 9.275     High High
cufflinks 10.225     High High
cufflinks 8.439     High High
cufflinks 2.158        
cufflinks 1.509        
cufflinks 1.096       Low
cufflinks 1.69        
cufflinks 4.112        
cufflinks 1.827        
cufflinks 2.958        
cufflinks 1.169       Low
cufflinks 0.985       Low
cufflinks 2.494        
cufflinks 1.253        
cufflinks 4.228        

0 Strain