Gene : Glyma.15G016500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  165
Name:  ? Glyma.15G016500 Secondary Identifier:  ? PAC:30498514
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G016500 0.5kb upstream 0.5kb upstream 6923 true Chr15: 1275248-1282170 Glycine max
Glyma.15G016500 0.5kb upstream 0.5kb upstream 500 false Chr15: 1281671-1282170 Glycine max
Glyma.15G016500 0.5kb downstream 0.5kb downstream 6923 true Chr15: 1274748-1281670 Glycine max
Glyma.15G016500 0.5kb downstream 0.5kb downstream 500 false Chr15: 1274748-1275247 Glycine max
Glyma.15G016500 1.0kb upstream 1.0kb upstream 7423 true Chr15: 1275248-1282670 Glycine max
Glyma.15G016500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1281671-1282670 Glycine max
Glyma.15G016500 1.0kb downstream 1.0kb downstream 7423 true Chr15: 1274248-1281670 Glycine max
Glyma.15G016500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1274248-1275247 Glycine max
Glyma.15G016500 2.0kb upstream 2.0kb upstream 8423 true Chr15: 1275248-1283670 Glycine max
Glyma.15G016500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1281671-1283670 Glycine max
Glyma.15G016500 2.0kb downstream 2.0kb downstream 8423 true Chr15: 1273248-1281670 Glycine max
Glyma.15G016500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1273248-1275247 Glycine max
Glyma.15G016500 5.0kb upstream 5.0kb upstream 11423 true Chr15: 1275248-1286670 Glycine max
Glyma.15G016500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1281671-1286670 Glycine max
Glyma.15G016500 5.0kb downstream 5.0kb downstream 11423 true Chr15: 1270248-1281670 Glycine max
Glyma.15G016500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1270248-1275247 Glycine max
Glyma.15G016500 10.0kb upstream 10.0kb upstream 16423 true Chr15: 1275248-1291670 Glycine max
Glyma.15G016500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1281671-1291670 Glycine max
Glyma.15G016500 10.0kb downstream 10.0kb downstream 16423 true Chr15: 1265248-1281670 Glycine max
Glyma.15G016500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1265248-1275247 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304917 5265 Fabidae View MSA
124070351 5270 Rosid View MSA
123746219 5271 Pentapetalae View MSA
122794350 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.571069 0.0 3.27285   Low
cufflinks 8.20082 0.0 31.1117   High
cufflinks 3.36549 0.0 13.1131    
cufflinks 3.65276 0.0 15.6412    
cufflinks 1.37343 0.0 7.15149    
cufflinks 1.38088 0.0 6.15183    
cufflinks 3.65587 0.0 15.8689    
cufflinks 3.17765 0.0 12.5889    
cufflinks 0.365563 0.0 1.66485   Low
cufflinks 0.367        
cufflinks 0.025     Low Low
cufflinks 0.877        
cufflinks 0.093     Low  
cufflinks 0.081        
cufflinks 0.004     Low Low
cufflinks 0.785        
cufflinks 0.115        
cufflinks 1.563       High
cufflinks 2.702       High
cufflinks 0.49        
cufflinks 0.027     Low Low
cufflinks 0.7        
cufflinks 0.711        
cufflinks 0.024     Low Low
cufflinks 0.643        
cufflinks 0.034     Low  

0 Strain