Gene : Glyma.15G016700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4673 - Transcription factor TMF, TATA element modulatory factor Genomic Order:  167
Name:  ? Glyma.15G016700 Secondary Identifier:  ? PAC:30498764
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G016700 0.5kb upstream 0.5kb upstream 9775 true Chr15: 1294624-1304398 Glycine max
Glyma.15G016700 0.5kb upstream 0.5kb upstream 500 false Chr15: 1294624-1295123 Glycine max
Glyma.15G016700 0.5kb downstream 0.5kb downstream 9775 true Chr15: 1295124-1304898 Glycine max
Glyma.15G016700 0.5kb downstream 0.5kb downstream 500 false Chr15: 1304399-1304898 Glycine max
Glyma.15G016700 1.0kb upstream 1.0kb upstream 10275 true Chr15: 1294124-1304398 Glycine max
Glyma.15G016700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1294124-1295123 Glycine max
Glyma.15G016700 1.0kb downstream 1.0kb downstream 10275 true Chr15: 1295124-1305398 Glycine max
Glyma.15G016700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1304399-1305398 Glycine max
Glyma.15G016700 2.0kb upstream 2.0kb upstream 11275 true Chr15: 1293124-1304398 Glycine max
Glyma.15G016700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1293124-1295123 Glycine max
Glyma.15G016700 2.0kb downstream 2.0kb downstream 11275 true Chr15: 1295124-1306398 Glycine max
Glyma.15G016700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1304399-1306398 Glycine max
Glyma.15G016700 5.0kb upstream 5.0kb upstream 14275 true Chr15: 1290124-1304398 Glycine max
Glyma.15G016700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1290124-1295123 Glycine max
Glyma.15G016700 5.0kb downstream 5.0kb downstream 14275 true Chr15: 1295124-1309398 Glycine max
Glyma.15G016700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1304399-1309398 Glycine max
Glyma.15G016700 10.0kb upstream 10.0kb upstream 19275 true Chr15: 1285124-1304398 Glycine max
Glyma.15G016700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1285124-1295123 Glycine max
Glyma.15G016700 10.0kb downstream 10.0kb downstream 19275 true Chr15: 1295124-1314398 Glycine max
Glyma.15G016700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1304399-1314398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307979 5265 Fabidae View MSA
124066379 5270 Rosid View MSA
123748834 5271 Pentapetalae View MSA
122790742 5272 Eudicot View MSA
122045363 5273 Angiosperm View MSA
121349790 5274 Embryophyte View MSA
123428716 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1139 0.0 37.6424   High
cufflinks 8.44668 0.0 29.0611   Low
cufflinks 10.6472 0.0 32.6778    
cufflinks 12.2294 0.0 38.8219   High
cufflinks 11.1115 0.0 34.0853    
cufflinks 9.29708 0.0 28.8492    
cufflinks 9.81371 0.0 34.1607    
cufflinks 10.8272 0.0 33.2599    
cufflinks 9.98514 0.0 30.6793    
cufflinks 3.97       High
cufflinks 2.718        
cufflinks 3.118        
cufflinks 3.983       High
cufflinks 4.219       High
cufflinks 2.418       Low
cufflinks 3.247        
cufflinks 1.74       Low
cufflinks 3.901       High
cufflinks 3.033        
cufflinks 3.033        
cufflinks 2.971        
cufflinks 3.214        
cufflinks 2.605        
cufflinks 3.219        
cufflinks 3.261        
cufflinks 2.735        

0 Strain