Gene : Glyma.15G018800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  188
Name:  ? Glyma.15G018800 Secondary Identifier:  ? PAC:30496147
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G018800 0.5kb upstream 0.5kb upstream 6480 true Chr15: 1432731-1439210 Glycine max
Glyma.15G018800 0.5kb upstream 0.5kb upstream 500 false Chr15: 1438711-1439210 Glycine max
Glyma.15G018800 0.5kb downstream 0.5kb downstream 6480 true Chr15: 1432231-1438710 Glycine max
Glyma.15G018800 0.5kb downstream 0.5kb downstream 500 false Chr15: 1432231-1432730 Glycine max
Glyma.15G018800 1.0kb upstream 1.0kb upstream 6980 true Chr15: 1432731-1439710 Glycine max
Glyma.15G018800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1438711-1439710 Glycine max
Glyma.15G018800 1.0kb downstream 1.0kb downstream 6980 true Chr15: 1431731-1438710 Glycine max
Glyma.15G018800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1431731-1432730 Glycine max
Glyma.15G018800 2.0kb upstream 2.0kb upstream 7980 true Chr15: 1432731-1440710 Glycine max
Glyma.15G018800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1438711-1440710 Glycine max
Glyma.15G018800 2.0kb downstream 2.0kb downstream 7980 true Chr15: 1430731-1438710 Glycine max
Glyma.15G018800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1430731-1432730 Glycine max
Glyma.15G018800 5.0kb upstream 5.0kb upstream 10980 true Chr15: 1432731-1443710 Glycine max
Glyma.15G018800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1438711-1443710 Glycine max
Glyma.15G018800 5.0kb downstream 5.0kb downstream 10980 true Chr15: 1427731-1438710 Glycine max
Glyma.15G018800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1427731-1432730 Glycine max
Glyma.15G018800 10.0kb upstream 10.0kb upstream 15980 true Chr15: 1432731-1448710 Glycine max
Glyma.15G018800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1438711-1448710 Glycine max
Glyma.15G018800 10.0kb downstream 10.0kb downstream 15980 true Chr15: 1422731-1438710 Glycine max
Glyma.15G018800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1422731-1432730 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306088 5265 Fabidae View MSA
124063908 5270 Rosid View MSA
123740118 5271 Pentapetalae View MSA
122786988 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.46602 0.0 12.1534    
cufflinks 4.91998 0.0 13.3349    
cufflinks 3.49967 0.0 9.70189    
cufflinks 5.92768 0.0 15.9152   High
cufflinks 4.74445 0.0 12.8645    
cufflinks 2.62907 0.0 7.51195   Low
cufflinks 6.19462 0.0 16.6042   High
cufflinks 3.61567 0.0 10.0035    
cufflinks 3.87194 0.0 10.6543    
cufflinks 4.442        
cufflinks 0.792       Low
cufflinks 4.674        
cufflinks 3.971        
cufflinks 4.804        
cufflinks 1.357       Low
cufflinks 6.431        
cufflinks 1.45        
cufflinks 4.926        
cufflinks 5.718        
cufflinks 6.902     High  
cufflinks 1.068       Low
cufflinks 6.813        
cufflinks 7.413       High
cufflinks 0.969       Low
cufflinks 6.451        
cufflinks 1.66        

0 Strain