Gene : Glyma.15G010000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11225 - NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN Genomic Order:  100
Name:  ? Glyma.15G010000 Secondary Identifier:  ? PAC:30497909
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G010000 0.5kb upstream 0.5kb upstream 9167 true Chr15: 766845-776011 Glycine max
Glyma.15G010000 0.5kb upstream 0.5kb upstream 500 false Chr15: 766845-767344 Glycine max
Glyma.15G010000 0.5kb downstream 0.5kb downstream 9167 true Chr15: 767345-776511 Glycine max
Glyma.15G010000 0.5kb downstream 0.5kb downstream 500 false Chr15: 776012-776511 Glycine max
Glyma.15G010000 1.0kb upstream 1.0kb upstream 9667 true Chr15: 766345-776011 Glycine max
Glyma.15G010000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 766345-767344 Glycine max
Glyma.15G010000 1.0kb downstream 1.0kb downstream 9667 true Chr15: 767345-777011 Glycine max
Glyma.15G010000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 776012-777011 Glycine max
Glyma.15G010000 2.0kb upstream 2.0kb upstream 10667 true Chr15: 765345-776011 Glycine max
Glyma.15G010000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 765345-767344 Glycine max
Glyma.15G010000 2.0kb downstream 2.0kb downstream 10667 true Chr15: 767345-778011 Glycine max
Glyma.15G010000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 776012-778011 Glycine max
Glyma.15G010000 5.0kb upstream 5.0kb upstream 13667 true Chr15: 762345-776011 Glycine max
Glyma.15G010000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 762345-767344 Glycine max
Glyma.15G010000 5.0kb downstream 5.0kb downstream 13667 true Chr15: 767345-781011 Glycine max
Glyma.15G010000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 776012-781011 Glycine max
Glyma.15G010000 10.0kb upstream 10.0kb upstream 18667 true Chr15: 757345-776011 Glycine max
Glyma.15G010000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 757345-767344 Glycine max
Glyma.15G010000 10.0kb downstream 10.0kb downstream 18667 true Chr15: 767345-786011 Glycine max
Glyma.15G010000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 776012-786011 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300861 5265 Fabidae View MSA
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.4969 0.0 29.8761    
cufflinks 10.2121 0.0 35.292    
cufflinks 5.49721 0.0 19.9847   Low
cufflinks 8.15206 0.0 29.1641    
cufflinks 10.3107 0.0 36.306    
cufflinks 6.05609 0.0 18.5909   Low
cufflinks 15.0025 0.0 52.9944   High
cufflinks 8.31906 0.0 29.3216    
cufflinks 9.08411 0.0 31.8563    
cufflinks 1.326        
cufflinks 0.41       Low
cufflinks 1.52        
cufflinks 2.328       High
cufflinks 2.897       High
cufflinks 0.834        
cufflinks 1.555        
cufflinks 0.789        
cufflinks 1.577        
cufflinks 2.482       High
cufflinks 1.081        
cufflinks 0.681       Low
cufflinks 1.319        
cufflinks 1.775        
cufflinks 0.468       Low
cufflinks 1.31        
cufflinks 0.839        

0 Strain