Gene : Glyma.15G010400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10410:SF2 - LYS-63-SPECIFIC DEUBIQUITINASE BRCC36 Genomic Order:  104
Name:  ? Glyma.15G010400 Secondary Identifier:  ? PAC:30497183
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G010400 0.5kb upstream 0.5kb upstream 5965 true Chr15: 799119-805083 Glycine max
Glyma.15G010400 0.5kb upstream 0.5kb upstream 500 false Chr15: 804584-805083 Glycine max
Glyma.15G010400 0.5kb downstream 0.5kb downstream 5965 true Chr15: 798619-804583 Glycine max
Glyma.15G010400 0.5kb downstream 0.5kb downstream 500 false Chr15: 798619-799118 Glycine max
Glyma.15G010400 1.0kb upstream 1.0kb upstream 6465 true Chr15: 799119-805583 Glycine max
Glyma.15G010400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 804584-805583 Glycine max
Glyma.15G010400 1.0kb downstream 1.0kb downstream 6465 true Chr15: 798119-804583 Glycine max
Glyma.15G010400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 798119-799118 Glycine max
Glyma.15G010400 2.0kb upstream 2.0kb upstream 7465 true Chr15: 799119-806583 Glycine max
Glyma.15G010400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 804584-806583 Glycine max
Glyma.15G010400 2.0kb downstream 2.0kb downstream 7465 true Chr15: 797119-804583 Glycine max
Glyma.15G010400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 797119-799118 Glycine max
Glyma.15G010400 5.0kb upstream 5.0kb upstream 10465 true Chr15: 799119-809583 Glycine max
Glyma.15G010400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 804584-809583 Glycine max
Glyma.15G010400 5.0kb downstream 5.0kb downstream 10465 true Chr15: 794119-804583 Glycine max
Glyma.15G010400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 794119-799118 Glycine max
Glyma.15G010400 10.0kb upstream 10.0kb upstream 15465 true Chr15: 799119-814583 Glycine max
Glyma.15G010400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 804584-814583 Glycine max
Glyma.15G010400 10.0kb downstream 10.0kb downstream 15465 true Chr15: 789119-804583 Glycine max
Glyma.15G010400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 789119-799118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306931 5265 Fabidae View MSA
124064840 5270 Rosid View MSA
123741552 5271 Pentapetalae View MSA
122788768 5272 Eudicot View MSA
122043403 5273 Angiosperm View MSA
121344026 5274 Embryophyte View MSA
123428720 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.554 0.0 54.9222    
cufflinks 22.2839 0.0 92.6549 High  
cufflinks 15.9257 0.0 65.013    
cufflinks 40.0866 0.0 189.118 High High
cufflinks 19.6949 0.0 81.0703    
cufflinks 11.8068 0.0 48.4707   Low
cufflinks 50.8535 0.0 255.197 High High
cufflinks 19.2442 0.0 79.7414    
cufflinks 23.6954 0.0 99.3495 High  
cufflinks 2.371        
cufflinks 0.868       Low
cufflinks 3.422        
cufflinks 2.828        
cufflinks 3.711        
cufflinks 1.818        
cufflinks 3.239        
cufflinks 1.143       Low
cufflinks 3.583        
cufflinks 3.679        
cufflinks 3.967       High
cufflinks 1.176       Low
cufflinks 3.661        
cufflinks 2.603        
cufflinks 1.086       Low
cufflinks 3.621        
cufflinks 1.161       Low

0 Strain