Gene : Glyma.15G011700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33427:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Genomic Order:  117
Name:  ? Glyma.15G011700 Secondary Identifier:  ? PAC:30496555
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G011700 0.5kb upstream 0.5kb upstream 4155 true Chr15: 898424-902578 Glycine max
Glyma.15G011700 0.5kb upstream 0.5kb upstream 500 false Chr15: 902079-902578 Glycine max
Glyma.15G011700 0.5kb downstream 0.5kb downstream 4155 true Chr15: 897924-902078 Glycine max
Glyma.15G011700 0.5kb downstream 0.5kb downstream 500 false Chr15: 897924-898423 Glycine max
Glyma.15G011700 1.0kb upstream 1.0kb upstream 4655 true Chr15: 898424-903078 Glycine max
Glyma.15G011700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 902079-903078 Glycine max
Glyma.15G011700 1.0kb downstream 1.0kb downstream 4655 true Chr15: 897424-902078 Glycine max
Glyma.15G011700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 897424-898423 Glycine max
Glyma.15G011700 2.0kb upstream 2.0kb upstream 5655 true Chr15: 898424-904078 Glycine max
Glyma.15G011700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 902079-904078 Glycine max
Glyma.15G011700 2.0kb downstream 2.0kb downstream 5655 true Chr15: 896424-902078 Glycine max
Glyma.15G011700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 896424-898423 Glycine max
Glyma.15G011700 5.0kb upstream 5.0kb upstream 8655 true Chr15: 898424-907078 Glycine max
Glyma.15G011700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 902079-907078 Glycine max
Glyma.15G011700 5.0kb downstream 5.0kb downstream 8655 true Chr15: 893424-902078 Glycine max
Glyma.15G011700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 893424-898423 Glycine max
Glyma.15G011700 10.0kb upstream 10.0kb upstream 13655 true Chr15: 898424-912078 Glycine max
Glyma.15G011700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 902079-912078 Glycine max
Glyma.15G011700 10.0kb downstream 10.0kb downstream 13655 true Chr15: 888424-902078 Glycine max
Glyma.15G011700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 888424-898423 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305246 5265 Fabidae View MSA
124074735 5270 Rosid View MSA
123746273 5271 Pentapetalae View MSA
122791628 5272 Eudicot View MSA
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0526167 0.0 0.208072 Low Low
cufflinks 8.40386 0.0 28.9639   High
cufflinks 0.4381 0.0 2.66969    
cufflinks 1.52662 0.0 4.9021    
cufflinks 2.80337 0.0 9.95477    
cufflinks 2.21606 0.0 7.98964    
cufflinks 2.2093 0.0 7.67202    
cufflinks 3.59304 0.0 11.5499    
cufflinks 3.42402 0.0 11.1378    
cufflinks 2.795        
cufflinks 0.179       Low
cufflinks 1.284        
cufflinks 3.006        
cufflinks 2.948        
cufflinks 0.029     Low Low
cufflinks 4.327        
cufflinks 0.606        
cufflinks 1.211        
cufflinks 4.417        
cufflinks 3.83        
cufflinks 0.306        
cufflinks 4.376        
cufflinks 5.67       High
cufflinks 0.079       Low
cufflinks 3.749        
cufflinks 0.682        

0 Strain